Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CYK59_RS00170 | Genome accession | NZ_CP025476 |
| Coordinates | 9507..10019 (+) | Length | 170 a.a. |
| NCBI ID | WP_076786702.1 | Uniprot ID | A0A1X7QGR0 |
| Organism | Latilactobacillus curvatus strain IRG2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4507..15019
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYK59_RS00160 (CYK59_00150) | gyrA | 6342..8928 (+) | 2587 | Protein_5 | DNA gyrase subunit A | - |
| CYK59_RS00165 (CYK59_00155) | rpsF | 9171..9467 (+) | 297 | WP_076786704.1 | 30S ribosomal protein S6 | - |
| CYK59_RS00170 (CYK59_00160) | ssb | 9507..10019 (+) | 513 | WP_076786702.1 | single-stranded DNA-binding protein | Machinery gene |
| CYK59_RS00175 (CYK59_00165) | rpsR | 10050..10289 (+) | 240 | WP_004265822.1 | 30S ribosomal protein S18 | - |
| CYK59_RS00180 (CYK59_00170) | - | 10506..12536 (+) | 2031 | WP_076786700.1 | DHH family phosphoesterase | - |
| CYK59_RS00185 (CYK59_00175) | rplI | 12558..13010 (+) | 453 | WP_004265788.1 | 50S ribosomal protein L9 | - |
| CYK59_RS00190 (CYK59_00180) | dnaB | 13155..14558 (+) | 1404 | WP_172821848.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18594.13 Da Isoelectric Point: 4.6856
>NTDB_id=261882 CYK59_RS00170 WP_076786702.1 9507..10019(+) (ssb) [Latilactobacillus curvatus strain IRG2]
MINRVVLVGRLTRDVDLRYTSSGAAVGTFSIAVNRQFTNANGDREADFINCVIWRKSAENFANFTKKGSLVGVDGRLQTR
NYENQQGQRVYVTEVVVDNFSLLESRTTTEQRQGDGASQNFNSNQSNGSQQSGFTSPQQSGNPSAANNTQADPFANNGQA
IDISDDDLPF
MINRVVLVGRLTRDVDLRYTSSGAAVGTFSIAVNRQFTNANGDREADFINCVIWRKSAENFANFTKKGSLVGVDGRLQTR
NYENQQGQRVYVTEVVVDNFSLLESRTTTEQRQGDGASQNFNSNQSNGSQQSGFTSPQQSGNPSAANNTQADPFANNGQA
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=261882 CYK59_RS00170 WP_076786702.1 9507..10019(+) (ssb) [Latilactobacillus curvatus strain IRG2]
ATGATTAATCGAGTTGTACTCGTTGGTCGGCTAACACGCGATGTTGACTTACGTTACACTTCTAGTGGTGCTGCAGTTGG
GACTTTCTCAATCGCAGTGAACCGTCAATTCACGAATGCCAATGGTGATCGTGAAGCAGACTTTATCAACTGTGTCATCT
GGCGTAAATCAGCGGAAAATTTCGCTAATTTCACTAAGAAAGGCTCACTAGTCGGAGTTGATGGCCGTCTACAAACGAGA
AATTATGAAAACCAACAAGGTCAACGTGTATACGTAACCGAAGTGGTCGTTGATAACTTCTCATTGTTAGAATCACGGAC
AACAACGGAGCAACGGCAAGGGGATGGCGCAAGCCAAAACTTTAACAGCAATCAAAGCAATGGTAGCCAACAATCTGGAT
TTACCAGCCCTCAACAATCGGGTAATCCATCAGCTGCAAATAACACTCAAGCCGATCCATTTGCAAATAATGGTCAAGCA
ATTGATATTTCAGATGATGATTTACCTTTCTAA
ATGATTAATCGAGTTGTACTCGTTGGTCGGCTAACACGCGATGTTGACTTACGTTACACTTCTAGTGGTGCTGCAGTTGG
GACTTTCTCAATCGCAGTGAACCGTCAATTCACGAATGCCAATGGTGATCGTGAAGCAGACTTTATCAACTGTGTCATCT
GGCGTAAATCAGCGGAAAATTTCGCTAATTTCACTAAGAAAGGCTCACTAGTCGGAGTTGATGGCCGTCTACAAACGAGA
AATTATGAAAACCAACAAGGTCAACGTGTATACGTAACCGAAGTGGTCGTTGATAACTTCTCATTGTTAGAATCACGGAC
AACAACGGAGCAACGGCAAGGGGATGGCGCAAGCCAAAACTTTAACAGCAATCAAAGCAATGGTAGCCAACAATCTGGAT
TTACCAGCCCTCAACAATCGGGTAATCCATCAGCTGCAAATAACACTCAAGCCGATCCATTTGCAAATAATGGTCAAGCA
ATTGATATTTCAGATGATGATTTACCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
97.647 |
100 |
0.976 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56 |
100 |
0.576 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
62.353 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
33.155 |
100 |
0.365 |