Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   SPSF3K_RS09985 Genome accession   NZ_CP025420
Coordinates   1980946..1981671 (-) Length   241 a.a.
NCBI ID   WP_003105648.1    Uniprot ID   A0A0E2UCE4
Organism   Streptococcus parauberis strain SPOF3K     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1975946..1986671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPSF3K_RS09950 (SPSF3K_02015) rnpM 1975991..1976287 (-) 297 WP_003104517.1 RNase P modulator RnpM -
  SPSF3K_RS09955 (SPSF3K_02016) nusA 1976303..1977457 (-) 1155 WP_003108096.1 transcription termination factor NusA -
  SPSF3K_RS09960 (SPSF3K_02017) rimP 1977546..1978028 (-) 483 WP_003107545.1 ribosome maturation factor RimP -
  SPSF3K_RS09970 (SPSF3K_02019) trmB 1978422..1979057 (-) 636 WP_003107546.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPSF3K_RS09975 (SPSF3K_02020) ccrZ 1979057..1979848 (-) 792 WP_003107547.1 cell cycle regulator CcrZ -
  SPSF3K_RS09980 (SPSF3K_02021) - 1979909..1980943 (-) 1035 WP_003107548.1 ABC transporter permease -
  SPSF3K_RS09985 (SPSF3K_02022) pptA 1980946..1981671 (-) 726 WP_003105648.1 ABC transporter ATP-binding protein Regulator
  SPSF3K_RS09990 (SPSF3K_02023) - 1981933..1982352 (+) 420 WP_003108095.1 HIT family protein -
  SPSF3K_RS09995 (SPSF3K_02024) - 1982349..1982651 (+) 303 WP_003108094.1 hypothetical protein -
  SPSF3K_RS10000 (SPSF3K_02025) brpA 1982684..1983973 (-) 1290 WP_003108093.1 biofilm formation/cell division transcriptional regulator BrpA -
  SPSF3K_RS10005 (SPSF3K_02026) - 1983982..1984506 (-) 525 WP_003107553.1 GNAT family N-acetyltransferase -
  SPSF3K_RS10010 (SPSF3K_02027) tsaE 1984493..1984942 (-) 450 WP_003103132.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPSF3K_RS10015 (SPSF3K_02028) - 1985031..1986491 (-) 1461 WP_003104259.1 NCS2 family permease -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26876.31 Da        Isoelectric Point: 5.6444

>NTDB_id=261189 SPSF3K_RS09985 WP_003105648.1 1980946..1981671(-) (pptA) [Streptococcus parauberis strain SPOF3K]
MLKIENLTGGYINIPVLKDISFSVDAGQLVGLIGLNGAGKSTTINEIIGLLRPYKGSITIDGISLIDDKTAYRKKIGFIP
ETPSLYEELTLAEHIETIAMAYDIPVKEAHDRAKPLLKTYRLEDKLDWYPVHFSKGMKQKVMIICAFIIDPRLFILDEPF
LGLDPLAIADLIAYLDEEKKKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGTLDDLRTAFGDNQASLNDIYLALTKE
A

Nucleotide


Download         Length: 726 bp        

>NTDB_id=261189 SPSF3K_RS09985 WP_003105648.1 1980946..1981671(-) (pptA) [Streptococcus parauberis strain SPOF3K]
ATGTTAAAAATTGAAAATCTGACAGGTGGTTATATTAATATCCCTGTTTTGAAGGACATTTCTTTTTCCGTTGATGCTGG
TCAATTAGTAGGATTAATTGGTTTGAATGGTGCAGGAAAATCAACGACAATCAATGAAATAATTGGTTTGTTAAGACCTT
ATAAAGGTAGCATTACCATTGATGGCATCTCCTTGATAGATGACAAAACAGCCTACAGGAAGAAAATTGGCTTTATACCC
GAAACACCAAGTCTTTACGAAGAATTGACCTTGGCTGAACACATTGAAACAATTGCCATGGCTTACGACATTCCAGTAAA
AGAAGCACATGATCGAGCAAAACCTTTATTGAAAACATATCGTTTGGAGGATAAATTGGATTGGTATCCCGTTCATTTTT
CTAAAGGAATGAAACAAAAAGTAATGATTATCTGTGCTTTTATTATTGATCCTAGGTTATTTATTCTAGATGAACCATTC
CTTGGCTTAGATCCGTTAGCAATTGCTGACTTAATTGCCTATTTGGACGAGGAAAAAAAGAAAGGCAAGTCAATTTTGAT
GAGTACACACGTTCTCGATTCTGCAGAAAAAATGTGTGATCGGTTTGTCATTTTACATCATGGACAAATCCGTGCCCAAG
GGACTTTGGACGATTTACGAACTGCATTTGGTGATAACCAGGCTAGTCTAAATGATATATACTTAGCCTTGACCAAAGAG
GCTTAA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E2UCE4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726

  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722


Multiple sequence alignment