Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | CWE28_RS15525 | Genome accession | NZ_CP030861 |
| Coordinates | 3183759..3184382 (+) | Length | 207 a.a. |
| NCBI ID | WP_003103268.1 | Uniprot ID | G3XD51 |
| Organism | Pseudomonas aeruginosa strain HS9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3178759..3189382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWE28_RS15510 (CWE28_15505) | - | 3179446..3181917 (-) | 2472 | WP_003095841.1 | penicillin-binding protein 1A | - |
| CWE28_RS15515 (CWE28_15510) | pilM | 3182102..3183166 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| CWE28_RS15520 (CWE28_15515) | pilN | 3183166..3183762 (+) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| CWE28_RS15525 (CWE28_15520) | pilO | 3183759..3184382 (+) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CWE28_RS15530 (CWE28_15525) | comL/pilP | 3184379..3184903 (+) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| CWE28_RS15535 (CWE28_15530) | pilQ | 3184957..3187101 (+) | 2145 | WP_023114914.1 | type 4a pilus secretin PilQ | Machinery gene |
| CWE28_RS15540 (CWE28_15535) | aroK | 3187113..3187631 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| CWE28_RS15545 (CWE28_15540) | aroB | 3187681..3188787 (+) | 1107 | WP_003162482.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22819.26 Da Isoelectric Point: 4.7787
>NTDB_id=261098 CWE28_RS15525 WP_003103268.1 3183759..3184382(+) (pilO) [Pseudomonas aeruginosa strain HS9]
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=261098 CWE28_RS15525 WP_003103268.1 3183759..3184382(+) (pilO) [Pseudomonas aeruginosa strain HS9]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGTGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTTGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTGGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGTGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTTGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTGGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
46.114 |
93.237 |
0.43 |
| pilO | Acinetobacter baumannii D1279779 |
43.979 |
92.271 |
0.406 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.455 |
92.271 |
0.401 |