Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | MXAN_RS05140 | Genome accession | NC_008095 |
| Coordinates | 1247763..1248260 (+) | Length | 165 a.a. |
| NCBI ID | WP_011551191.1 | Uniprot ID | Q1DDE2 |
| Organism | Myxococcus xanthus DK 1622 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1242763..1253260
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MXAN_RS05120 (MXAN_1066) | - | 1243322..1243783 (+) | 462 | WP_011551186.1 | PTS sugar transporter subunit IIA | - |
| MXAN_RS05125 (MXAN_1067) | - | 1243817..1244662 (+) | 846 | WP_026113883.1 | hypothetical protein | - |
| MXAN_RS05130 (MXAN_1068) | dtd | 1244659..1245120 (-) | 462 | WP_011551188.1 | D-aminoacyl-tRNA deacylase | - |
| MXAN_RS05135 (MXAN_1070) | dacB | 1245306..1247552 (+) | 2247 | WP_011551190.1 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase | - |
| MXAN_RS05140 (MXAN_1071) | ssb | 1247763..1248260 (+) | 498 | WP_011551191.1 | single-stranded DNA-binding protein | Machinery gene |
| MXAN_RS05145 (MXAN_1072) | - | 1248383..1249063 (-) | 681 | WP_011551192.1 | succinate dehydrogenase | - |
| MXAN_RS05150 (MXAN_1073) | - | 1249326..1250210 (+) | 885 | WP_011551193.1 | Hsp33 family molecular chaperone HslO | - |
| MXAN_RS05155 (MXAN_1074) | - | 1250233..1251276 (+) | 1044 | WP_225888549.1 | Leu/Phe/Val dehydrogenase | - |
| MXAN_RS05160 (MXAN_1075) | - | 1251339..1252082 (+) | 744 | WP_011551195.1 | phosphoribosyltransferase | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 17629.34 Da Isoelectric Point: 5.7963
>NTDB_id=25969 MXAN_RS05140 WP_011551191.1 1247763..1248260(+) (ssb) [Myxococcus xanthus DK 1622]
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYVEG
RLQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMGGGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGGNGD
DDIPF
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYVEG
RLQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMGGGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGGNGD
DDIPF
Nucleotide
Download Length: 498 bp
>NTDB_id=25969 MXAN_RS05140 WP_011551191.1 1247763..1248260(+) (ssb) [Myxococcus xanthus DK 1622]
ATGGCTGGAGGCGTGAACAAGGTCATCCTCATCGGCAACCTCGGGGCGGACCCGGAGGTCCGGTTCACTCCCGGCGGTCA
GGCGGTGGCGAACTTCCGCATCGCCACCAGCGAGAGCTGGGTCGACAAGAATGGCCAGAAGCAGGAGCGGACCGAGTGGC
ACCGCATCGTCGTCTGGGGAAAGCTCGCGGAGCTCTGCGGCGAGTACCTGAAGAAGGGACGGCAGTGCTACGTCGAGGGC
CGCCTGCAGACGCGCGAGTGGACGGACAAGGAGAACCGGAAGAACTACACCACCGAGGTGGTGGCCAACGCCGTGACGTT
CCTCGGCGGTGGTGGCCGTGACGCCGGAGACGGCATGGGCGGCGGGGGCGGGGGCGGTGGACGCCGGCAGTTCTCCCAGC
AGCGTGGGGGAGACAACAACGACTACGGTCAGCCGCCTCCGGACGACATGGGCGGTGGCCATGGCGGCGGCAACGGCGAC
GACGACATCCCCTTCTAG
ATGGCTGGAGGCGTGAACAAGGTCATCCTCATCGGCAACCTCGGGGCGGACCCGGAGGTCCGGTTCACTCCCGGCGGTCA
GGCGGTGGCGAACTTCCGCATCGCCACCAGCGAGAGCTGGGTCGACAAGAATGGCCAGAAGCAGGAGCGGACCGAGTGGC
ACCGCATCGTCGTCTGGGGAAAGCTCGCGGAGCTCTGCGGCGAGTACCTGAAGAAGGGACGGCAGTGCTACGTCGAGGGC
CGCCTGCAGACGCGCGAGTGGACGGACAAGGAGAACCGGAAGAACTACACCACCGAGGTGGTGGCCAACGCCGTGACGTT
CCTCGGCGGTGGTGGCCGTGACGCCGGAGACGGCATGGGCGGCGGGGGCGGGGGCGGTGGACGCCGGCAGTTCTCCCAGC
AGCGTGGGGGAGACAACAACGACTACGGTCAGCCGCCTCCGGACGACATGGGCGGTGGCCATGGCGGCGGCAACGGCGAC
GACGACATCCCCTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
47.253 |
100 |
0.521 |
| ssb | Glaesserella parasuis strain SC1401 |
41.989 |
100 |
0.461 |
| ssb | Neisseria meningitidis MC58 |
42.197 |
100 |
0.442 |
| ssb | Neisseria gonorrhoeae MS11 |
42.197 |
100 |
0.442 |