Detailed information NTG0258687

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CXB48_RS18805
• Genome accession: NZ_CP025149
• Coordinates: 3907242..3908579 (+)
• Length: 445 a.a.
• NCBI ID: WP_026006503.1
• Uniprot ID: A0A137YGV3
• Organism: Stutzerimonas stutzeri strain SGAir0442
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3902242..3913579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXB48_RS18780 (CXB48_18720)	pgeF	3902272..3903009 (-)	738	WP_017244513.1	peptidoglycan editing factor PgeF	-
CXB48_RS18785 (CXB48_18725)	rluD	3903006..3903980 (-)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
CXB48_RS18790 (CXB48_18730)	-	3904185..3905174 (+)	990	WP_013984073.1	outer membrane protein assembly factor BamD	-
CXB48_RS18795 (CXB48_18735)	-	3905296..3905529 (+)	234	WP_013984074.1	PP0621 family protein	-
CXB48_RS18800 (CXB48_18740)	pilS	3905519..3907111 (+)	1593	WP_108242334.1	sensor histidine kinase	Regulator
CXB48_RS18805 (CXB48_18745)	pilR	3907242..3908579 (+)	1338	WP_026006503.1	sigma-54-dependent transcriptional regulator	Regulator
CXB48_RS18810 (CXB48_18750)	-	3908623..3909681 (-)	1059	WP_011914666.1	DUF2333 family protein	-
CXB48_RS18815 (CXB48_18755)	-	3909900..3911495 (+)	1596	WP_011914667.1	diguanylate cyclase	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49558.09 Da
• Isoelectric Point: 6.4140

>NTDB_id=258687 CXB48_RS18805 WP_026006503.1 3907242..3908579(+) (pilR) [Stutzerimonas stutzeri strain SGAir0442]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=258687 CXB48_RS18805 WP_026006503.1 3907242..3908579(+) (pilR) [Stutzerimonas stutzeri strain SGAir0442]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCAT
GAAGCTCGATACCCGCAGCGCACGCAACCTAAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGCGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGCGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGT
GGACCTGAACCGCCTGCGCGAGCTGGTCAGCACCGCCCTGCGCCTGCGCGCGCCCGCAGCCGAGGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGATGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCCCCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCCAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGCGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAATGTCATCGAACTGCGTGTACCGCCACTGCGCGAACGCCGCGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCG
CTTTCCGGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCCGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAGCG
ACTGGGGCTGACCTTCCGCTCGATGCGTTACCGTCTGAAGAAACTCGGCCTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

3D structure

• AlphaFold DB: A0A137YGV3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.586	99.775	0.854
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	38.117	100	0.382