Detailed information NTG0258606

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: DOU34_RS15610
• Genome accession: NZ_CP030097
• Coordinates: 3150919..3152904 (-)
• Length: 661 a.a.
• NCBI ID: WP_003151439.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain SH-B74
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3145919..3157904

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DOU34_RS15590	-	3146106..3147203 (-)	1098	WP_007614045.1	DUF4097 domain-containing protein	-
DOU34_RS15595	-	3147228..3147554 (-)	327	WP_003151444.1	hypothetical protein	-
DOU34_RS15600	-	3147752..3148012 (+)	261	WP_032867067.1	hypothetical protein	-
DOU34_RS15605	uvrA	3148038..3150911 (-)	2874	WP_012118558.1	excinuclease ABC subunit UvrA	Machinery gene
DOU34_RS15610	uvrB	3150919..3152904 (-)	1986	WP_003151439.1	excinuclease ABC subunit UvrB	Machinery gene
DOU34_RS15615	-	3153080..3153316 (-)	237	WP_003151438.1	CsbA family protein	-
DOU34_RS15620	-	3153618..3156119 (+)	2502	WP_061047050.1	PEP/pyruvate-binding domain-containing protein	-
DOU34_RS15625	-	3156191..3156814 (+)	624	WP_015240677.1	TetR/AcrR family transcriptional regulator	-

Sequence

Protein

• Length: 661 a.a.
• Molecular weight: 76447.20 Da
• Isoelectric Point: 5.1906

>NTDB_id=258606 DOU34_RS15610 WP_003151439.1 3150919..3152904(-) (uvrB) [Bacillus amyloliquefaciens strain SH-B74]
MKDRFELVSKYQPQGDQPQAIEKLVKGIQEGRKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEF
FPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYREMVVS
LRPEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGEILGDRDH
VAIFPASHFVTRAEKMEKAILNIEQELEERLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGS
TPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYE
IEHTPEMIEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKHDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITNSM
EIAINETKRRREQQERFNEIHGITPQTINKEIRDVIRATQAAEDKEEYKTKAAPKLAKMTKKERQKVVEQMEHEMKEAAR
ALDFERAAELRDLLLELKAEG

Nucleotide

• Length: 1986 bp

>NTDB_id=258606 DOU34_RS15610 WP_003151439.1 3150919..3152904(-) (uvrB) [Bacillus amyloliquefaciens strain SH-B74]
GTGAAAGATCGTTTTGAGTTAGTCTCGAAATATCAGCCCCAGGGAGATCAGCCGCAAGCGATTGAGAAGCTTGTCAAAGG
CATACAGGAAGGCAGAAAACACCAGACTCTCCTGGGTGCGACAGGGACGGGCAAAACCTTTACCGTGTCCAATCTGATTA
AAGAAGTGAATAAACCGACACTGGTCATTGCCCATAACAAAACCCTTGCCGGACAGCTGTACAGCGAGTTTAAGGAGTTT
TTCCCGAACAACGCTGTCGAATATTTTGTCAGCTATTACGATTACTATCAGCCGGAGGCGTACGTGCCTCAAACGGATAC
TTTTATAGAGAAAGACGCAAGCATTAATGATGAAATTGATAAACTGAGACACTCCGCGACATCCTCTCTGTTTGAACGGA
GAGATGTCATTATTATCGCGAGTGTGTCATGCATATACGGTCTCGGTTCGCCTGAAGAATATCGGGAAATGGTTGTGTCG
CTCAGACCGGAAATGGAGATTGAGCGAAATGAGCTGCTGAGAAAGCTTGTGGATATCCAGTATGCCCGCAATGATATCGA
CTTTCAGCGCGGGACGTTCCGCGTGCGCGGAGACGTTGTGGAAATCTTTCCGGCTTCCCGTGACGAACATTGTATCAGAG
TGGAATTTTTCGGAGATGAAATTGAGCGGATCAGAGAGGTCGACGCTTTGACCGGAGAAATTCTCGGCGACCGTGATCAT
GTCGCGATTTTCCCGGCTTCCCACTTCGTCACCCGGGCGGAAAAGATGGAAAAAGCGATTCTGAATATTGAACAGGAGCT
TGAGGAGCGCTTGAAAGTGATGCACGAAAACGGCAAGCTCCTTGAAGCGCAGCGGCTTGAGCAGCGGACGAGATATGATC
TTGAAATGATGCGGGAAATGGGTTTTTGCTCAGGGATCGAGAACTATTCAAGACATTTGACACTCCGACCGCCGGGCTCT
ACGCCGTATACGCTGCTTGATTATTTTCCGGACGATTTTATGATTGTCGTTGATGAATCACATGTGACGATTCCGCAGGT
GCGCGGCATGTTCAACGGTGACCAGGCGAGAAAACAGGTGCTTGTCGATCACGGGTTCCGCCTGCCGTCAGCGCTTGACA
ACCGTCCGCTCCGATTCGAGGAATTTGAGAAACACATGCACAATATCGTGTACGTGTCGGCGACTCCGGGACCGTATGAA
ATTGAGCATACGCCGGAAATGATCGAGCAGATCATCAGACCGACGGGACTCCTCGATCCCCTCATTGACGTCCGGCCGAT
CGAAGGACAGATTGATGATCTGATCGGCGAGATTCAGGCGAGGATTGAACGGAATGAACGCGTTCTCGTGACGACTTTAA
CGAAAAAAATGTCAGAGGATCTGACCGATTATCTCAAGGAAATCGGCATCAAGGTCAATTATCTGCATTCCGAGATTAAG
ACGCTTGAACGGATTGAAATCATCCGTGACCTCCGCCTCGGAAAACATGATGTGTTAATCGGCATCAACCTGCTGAGGGA
AGGGCTTGATATTCCGGAAGTGTCACTTGTCGCCATTCTCGATGCGGATAAAGAAGGCTTCCTCCGTTCTGAACGTTCGC
TGATTCAGACGATCGGACGGGCGGCGCGAAACGCGGAAGGCCGCGTCATCATGTATGCCGATAAAATCACGAATTCGATG
GAAATCGCGATTAATGAAACGAAGCGCCGCCGGGAACAGCAGGAGCGCTTTAACGAAATTCACGGCATTACGCCGCAAAC
GATCAATAAGGAAATCCGCGATGTGATCCGCGCGACGCAGGCCGCTGAGGATAAAGAAGAATATAAAACAAAAGCCGCGC
CTAAACTGGCGAAGATGACGAAGAAAGAACGCCAGAAAGTCGTTGAGCAAATGGAGCACGAAATGAAAGAAGCGGCCAGA
GCGCTTGATTTCGAGCGGGCGGCAGAGCTTCGTGATTTACTGTTAGAGCTTAAAGCGGAAGGATGA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (440-544)

• UvrB/uvrC motif (UVR) (626-659)

• Ultra-violet resistance protein B (UvrB) (551-593)

• Type III restriction enzyme, res subunit (ResIII) (12-130)

• UvrB interaction domain (UvrB_inter) (159-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	70.472	99.395	0.7
uvrB	Streptococcus pneumoniae R6	70.32	99.395	0.699
uvrB	Streptococcus pneumoniae D39	70.32	99.395	0.699