Detailed information NTG0258605

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: DOU34_RS15605
• Genome accession: NZ_CP030097
• Coordinates: 3148038..3150911 (-)
• Length: 957 a.a.
• NCBI ID: WP_012118558.1
• Uniprot ID: A7Z984
• Organism: Bacillus amyloliquefaciens strain SH-B74
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3143038..3155911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DOU34_RS15580	-	3145547..3145906 (-)	360	WP_007407446.1	phage holin family protein	-
DOU34_RS15585	-	3145907..3146101 (-)	195	WP_007407447.1	PspC domain-containing protein	-
DOU34_RS15590	-	3146106..3147203 (-)	1098	WP_007614045.1	DUF4097 domain-containing protein	-
DOU34_RS15595	-	3147228..3147554 (-)	327	WP_003151444.1	hypothetical protein	-
DOU34_RS15600	-	3147752..3148012 (+)	261	WP_032867067.1	hypothetical protein	-
DOU34_RS15605	uvrA	3148038..3150911 (-)	2874	WP_012118558.1	excinuclease ABC subunit UvrA	Machinery gene
DOU34_RS15610	uvrB	3150919..3152904 (-)	1986	WP_003151439.1	excinuclease ABC subunit UvrB	Machinery gene
DOU34_RS15615	-	3153080..3153316 (-)	237	WP_003151438.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106117.37 Da
• Isoelectric Point: 6.4146

>NTDB_id=258605 DOU34_RS15605 WP_012118558.1 3148038..3150911(-) (uvrA) [Bacillus amyloliquefaciens strain SH-B74]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQAVCRHYGIDMETPVKDLPKHQLDKVLYGSGDERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKSCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=258605 DOU34_RS15605 WP_012118558.1 3148038..3150911(-) (uvrA) [Bacillus amyloliquefaciens strain SH-B74]
ATGGCAATTGACCGGATCGAGGTGAAAGGCGCAAGGGCGCACAATTTAAAAAACATTGATGTAACGATTCCGCGGGATCA
GCTCGTCGTCGTGACGGGGCTGTCCGGATCGGGAAAATCATCCCTTGCCTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCTGCCTATGCACGCCAATTTTTAGGGCAGATGGATAAGCCGGACGTTGATGCGATCGAAGGG
CTTTCCCCGGCGATCAGCATTGACCAGAAAACGACAAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACGGAGATTTA
TGATTATCTCCGGCTGCTGTACGCGAGAGTCGGGAAGCCGCACTGCCCGGAGCACGGCATTGAAATTACGTCGCAAACGA
TTGAACAGATGGTTGACCGGATTCTTGAATATCCGGAGCGGACGAAGCTTCAAGTGCTTGCGCCTATCATCTCAGGCAGA
AAAGGCGCCCATGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGGGTGCGGATTGACGGAGAAATGGCCGA
GCTTTCCGACGATATTGAACTTGAAAAAAACAAAAAGCATTCCATTGAAGTAGTCATTGACCGGATTGTCGTCAAGGAAG
GGGTTGCCGCCCGGCTTTCCGACTCGCTGGAAACCGCGCTCCGTTTAGGGGAAGGCCGTGTCATGATAGATGTCATCGGT
CAGGAGGAGCTGATGTTCAGCGAGCATCACGCCTGTCCGCTGTGCGGTTTTTCTATCGGGGAGCTTGAACCCCGGCTGTT
TTCATTTAACAGTCCGTTCGGCGCCTGTCCGACTTGCGACGGTCTCGGCTTGAAGCTGGAAGTGGACCCTGAGCTCGTCA
TCCCCAATCCCGAGCTGTCATTAAAGGAACACGCCATCGCGCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGGCGGTCTGCCGCCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAAGCATCAGCTTGATAAAGT
GCTGTACGGCAGCGGCGATGAACGGATCTACTTTAAATACGAGAATGATTTCGGACAAGTGCGCGAAAATGAAATTGAAT
TTGAAGGTGTGCTGCGCAATATTGAGAGACGGTATAAAGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAATCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTTGCCGTTTTGGTCAACGGGCGTCA
TATCGGAACCATTACCGAACTTTCTGTCGGCGACGCGCTTGAATTTTTCAAAAACCTGACGCTGTCTGAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAGATTGTGGAGCGGCTCAGCTTCTTAGATAAAGTCGGTCTTGATTACCTGACGCTG
AGCCGGGCGGCGGGCACGCTGTCAGGCGGAGAAGCCCAGCGCATCAGGCTTGCGACGCAGATCGGCTCCCGTTTGTCAGG
CGTCCTGTATATTCTTGATGAGCCGTCCATCGGCCTTCACCAGCGTGACAATGACCGTCTGATCAGCGCGCTGAAAAACA
TGAGGGATCTCGGCAACACACTGATTGTCGTTGAGCATGATGAGGATACGATGATGGCTGCCGATTATTTGATAGATATC
GGTCCGGGCGCCGGCATTCACGGCGGCCGCGTCATATCGGCGGGGACGCCAGAAGAAGTGATGAATGATGCGGACTCTCT
GACCGGACGCTATTTGTCAGGGGCTCAATTCATCCCGATGCCTCCGGAGAGAAGAAAGCCTGACGGCCGGTTCATTGAAA
TCAAAGGCGCTTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTG
TCCGGTTCCGGAAAAAGCACGCTTGTGAATGAAATTCTGCATAAGGCGCTTGCGCAAAAGCTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAAATCAAAGGCCTTGACCACCTTGATAAGGTGATCGACATCGACCAGGCGCCGATCGGCCGGA
CACCGAGATCAAATCCGGCAACTTATACGGGCGTGTTTGATGATATCCGCGATGTATTCGCGCAGACAAATGAAGCAAAG
GTGCGCGGCTATAAAAAAGGCCGGTTCAGTTTTAATGTAAAAGGCGGGCGCTGTGAGGCCTGCCGCGGCGACGGCATCAT
CAAAATTGAGATGCATTTCCTTCCTGACGTGTACGTCCCGTGTGAAGTGTGCCACGGCAAACGTTACAACCGGGAGACGC
TGGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTCTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTCGGACTCGGGTATGTGACGCTCGGCCAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTCAAGCTTGCTTCCGAATTGCATAAGCGTTCCACAGGCCGGACGCTGTATATTC
TGGACGAACCGACGACAGGACTCCACGTTGATGATATCGCAAGGCTTTTGGTTGTGCTTCAAAGACTCGTCGATAACGGT
GATACCGTTTTGGTCATTGAACACAATCTCGACATCATTAAAACGGCGGACTACATCGTAGACCTGGGACCTGAAGGCGG
AGCGGGCGGCGGCACGATCGTAGCCTCCGGGACGCCTGAAGAAGTTGTCGAAGTGAAAGAATCATATACGGGCCGCTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCTGAAAAAGAAACGGCAGCCACATAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-858)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

• UvrA interaction domain (UvrA_inter) (132-238)

3D structure

• AlphaFold DB: A7Z984

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae TIGR4	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae D39	69.091	97.701	0.675