Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | DK877_RS09205 | Genome accession | NZ_CP030023 |
| Coordinates | 1850161..1851201 (-) | Length | 346 a.a. |
| NCBI ID | WP_013730555.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain ISU2414 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1845161..1856201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK877_RS11315 | - | 1845996..1846113 (-) | 118 | Protein_1775 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
| DK877_RS09175 (DK877_09445) | - | 1846131..1846439 (-) | 309 | WP_002942377.1 | YlxQ-related RNA-binding protein | - |
| DK877_RS09180 (DK877_09450) | rnpM | 1846426..1846722 (-) | 297 | WP_002942375.1 | RNase P modulator RnpM | - |
| DK877_RS09185 (DK877_09455) | nusA | 1846739..1847881 (-) | 1143 | WP_004194726.1 | transcription termination factor NusA | - |
| DK877_RS09190 (DK877_09460) | rimP | 1847954..1848424 (-) | 471 | WP_002942369.1 | ribosome maturation factor RimP | - |
| DK877_RS09195 (DK877_09465) | trmB | 1848682..1849320 (-) | 639 | WP_002939002.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| DK877_RS09200 (DK877_09470) | ccrZ | 1849317..1850111 (-) | 795 | WP_013730554.1 | cell cycle regulator CcrZ | - |
| DK877_RS09205 (DK877_09475) | pptB | 1850161..1851201 (-) | 1041 | WP_013730555.1 | ABC transporter permease | Regulator |
| DK877_RS09210 (DK877_09480) | pptA | 1851198..1851932 (-) | 735 | WP_002939204.1 | ABC transporter ATP-binding protein | Regulator |
| DK877_RS09215 (DK877_09485) | - | 1851995..1852408 (+) | 414 | WP_002939203.1 | HIT family protein | - |
| DK877_RS09220 (DK877_09490) | - | 1852410..1852712 (+) | 303 | WP_002939199.1 | hypothetical protein | - |
| DK877_RS09225 (DK877_09495) | - | 1852821..1854014 (-) | 1194 | WP_002939198.1 | LCP family protein | - |
| DK877_RS09230 (DK877_09500) | - | 1854011..1854538 (-) | 528 | WP_002939196.1 | GNAT family N-acetyltransferase | - |
| DK877_RS09235 (DK877_09505) | tsaE | 1854531..1854971 (-) | 441 | WP_024376437.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
Sequence
Protein
Download Length: 346 a.a. Molecular weight: 40172.54 Da Isoelectric Point: 10.0123
>NTDB_id=258396 DK877_RS09205 WP_013730555.1 1850161..1851201(-) (pptB) [Streptococcus suis strain ISU2414]
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLSFPENPLPIVFVVIAISLLVLVSGRIATYLEE
ADQIFLLTKEKDILQGLEVAARCTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYITQLYPLEKDSKKIGLQNLLRVILYSLLLVELGFALLFSKENT
MVVVLLLVGIFLHEIYLPLKLKKLID
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLSFPENPLPIVFVVIAISLLVLVSGRIATYLEE
ADQIFLLTKEKDILQGLEVAARCTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVAGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYITQLYPLEKDSKKIGLQNLLRVILYSLLLVELGFALLFSKENT
MVVVLLLVGIFLHEIYLPLKLKKLID
Nucleotide
Download Length: 1041 bp
>NTDB_id=258396 DK877_RS09205 WP_013730555.1 1850161..1851201(-) (pptB) [Streptococcus suis strain ISU2414]
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGACCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATACCGTCAATTATTGTTGTCGTTCCCTGAGAATC
CGTTGCCGATTGTTTTTGTGGTTATTGCAATCAGTCTACTGGTACTAGTGTCCGGAAGAATTGCGACTTATCTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGTTGCAGCCAGATGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TAGCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTCAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCAAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACGACGGT
TAAAGGAATCAGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTTGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCCATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTTCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATATAACACAACTGTATCCTCTGGAGAAAGATTCCAAGAAAATTGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTACTGGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATACG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGACCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATACCGTCAATTATTGTTGTCGTTCCCTGAGAATC
CGTTGCCGATTGTTTTTGTGGTTATTGCAATCAGTCTACTGGTACTAGTGTCCGGAAGAATTGCGACTTATCTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGTTGCAGCCAGATGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TAGCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTCAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCAAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACGACGGT
TAAAGGAATCAGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTTGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCCATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTTCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATATAACACAACTGTATCCTCTGGAGAAAGATTCCAAGAAAATTGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTACTGGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATACG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus salivarius strain HSISS4 |
45.739 |
100 |
0.465 |
| pptB | Streptococcus thermophilus LMD-9 |
44.886 |
100 |
0.457 |