Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   BVQ_RS01760 Genome accession   NZ_CP025079
Coordinates   364019..364417 (-) Length   132 a.a.
NCBI ID   WP_020955304.1    Uniprot ID   -
Organism   Bacillus velezensis strain QST713     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 359019..369417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVQ_RS01735 (BVQ_01735) - 359190..360392 (+) 1203 WP_014416870.1 GTP-binding protein -
  BVQ_RS01740 (BVQ_01740) - 360457..361593 (+) 1137 WP_025284207.1 zinc-dependent alcohol dehydrogenase -
  BVQ_RS01745 (BVQ_01745) - 361608..362042 (+) 435 WP_012116767.1 RDD family protein -
  BVQ_RS01750 (BVQ_01750) - 362160..362438 (+) 279 WP_263612330.1 YckD family protein -
  BVQ_RS01755 (BVQ_01755) - 362542..363978 (+) 1437 WP_053573745.1 glycoside hydrolase family 1 protein -
  BVQ_RS01760 (BVQ_01760) nin/comJ 364019..364417 (-) 399 WP_020955304.1 competence protein ComJ Regulator
  BVQ_RS01765 (BVQ_01765) nucA/comI 364438..364875 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  BVQ_RS01770 (BVQ_01770) hxlB 365234..365791 (-) 558 WP_053573744.1 6-phospho-3-hexuloisomerase -
  BVQ_RS01775 (BVQ_01775) hxlA 365788..366423 (-) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  BVQ_RS01780 (BVQ_01780) - 366655..367017 (+) 363 WP_007409352.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.97 Da        Isoelectric Point: 4.9712

>NTDB_id=258173 BVQ_RS01760 WP_020955304.1 364019..364417(-) (nin/comJ) [Bacillus velezensis strain QST713]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=258173 BVQ_RS01760 WP_020955304.1 364019..364417(-) (nin/comJ) [Bacillus velezensis strain QST713]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75

Multiple sequence alignment