Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   CVO91_RS09830 Genome accession   NZ_CP024974
Coordinates   1928400..1929044 (+) Length   214 a.a.
NCBI ID   WP_002942854.1    Uniprot ID   A0A0M9FM24
Organism   Streptococcus suis strain CZ130302     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1923400..1934044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS09805 (CVO91_09805) - 1924059..1925396 (-) 1338 WP_002942867.1 hemolysin family protein -
  CVO91_RS09810 (CVO91_09810) - 1925529..1926308 (+) 780 WP_002942865.1 ABC transporter ATP-binding protein -
  CVO91_RS09815 (CVO91_09815) - 1926324..1926878 (-) 555 WP_002942863.1 class I SAM-dependent methyltransferase -
  CVO91_RS09820 (CVO91_09820) - 1926888..1927406 (-) 519 WP_100664907.1 TetR/AcrR family transcriptional regulator -
  CVO91_RS09825 (CVO91_09825) - 1927528..1928346 (+) 819 WP_002942859.1 cation diffusion facilitator family transporter -
  CVO91_RS09830 (CVO91_09830) cclA/cilC 1928400..1929044 (+) 645 WP_002942854.1 A24 family peptidase Machinery gene
  CVO91_RS09835 (CVO91_09835) - 1929152..1930612 (+) 1461 WP_100664908.1 nicotinate phosphoribosyltransferase -
  CVO91_RS09840 (CVO91_09840) nadE 1930625..1931449 (+) 825 WP_100664909.1 ammonia-dependent NAD(+) synthetase -
  CVO91_RS09845 (CVO91_09845) trpB 1931491..1932666 (-) 1176 WP_100664910.1 tryptophan synthase subunit beta -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24144.21 Da        Isoelectric Point: 8.4760

>NTDB_id=256938 CVO91_RS09830 WP_002942854.1 1928400..1929044(+) (cclA/cilC) [Streptococcus suis strain CZ130302]
MKTIILFFLGASIGSFLGLVIDRFPEQSIISPSSHCNACKRRLKAWDLIPILSQLSTKSKCRYCKAKIPYWYLGLEVLAG
LVVLLCHFQVLNLTETILSLAGLVLTIYDIKHQEYPFAVWLVFTFIALVLSQLNWLFCGFLLLAYLTEKWQVSIGSGDFL
YLASLALICGFTELLWIIQISSLLGLLVFTIFKPKSIPYVPLLFLSSIPIILCI

Nucleotide


Download         Length: 645 bp        

>NTDB_id=256938 CVO91_RS09830 WP_002942854.1 1928400..1929044(+) (cclA/cilC) [Streptococcus suis strain CZ130302]
ATGAAGACAATTATCCTATTTTTCCTTGGAGCTTCTATCGGCTCCTTCTTGGGATTGGTCATCGACCGTTTCCCTGAACA
GTCCATTATCTCCCCCTCCAGTCACTGCAATGCCTGCAAGCGACGACTCAAGGCCTGGGACCTAATACCCATCCTGTCCC
AGCTTTCGACAAAATCCAAATGCCGTTACTGCAAGGCGAAGATACCTTATTGGTATCTGGGACTAGAAGTCTTAGCTGGT
CTAGTCGTCCTGCTCTGCCATTTTCAAGTCCTAAACCTAACCGAAACCATTCTCAGCTTAGCAGGGCTAGTTTTAACCAT
TTACGACATCAAGCATCAGGAATATCCTTTTGCTGTCTGGCTCGTTTTTACTTTTATAGCTCTGGTACTCTCCCAGCTCA
ACTGGCTTTTCTGTGGCTTTTTACTCTTGGCCTATCTGACTGAAAAATGGCAAGTCAGTATTGGTTCTGGTGACTTTCTC
TATCTGGCAAGTTTGGCCTTAATATGTGGATTTACAGAACTCCTCTGGATTATCCAGATTAGTTCCCTCCTAGGGCTTCT
TGTCTTCACTATTTTCAAACCCAAGTCTATTCCCTACGTACCACTCCTTTTTCTTTCAAGTATTCCTATCATTCTGTGCA
TCTAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M9FM24

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

49.528

99.065

0.491
  cclA/cilC Streptococcus pneumoniae Rx1

48.113

99.065

0.477
  cclA/cilC Streptococcus pneumoniae D39

48.113

99.065

0.477
  cclA/cilC Streptococcus pneumoniae R6

48.113

99.065

0.477
  cclA/cilC Streptococcus pneumoniae TIGR4

47.17

99.065

0.467
  cclA/cilC Streptococcus mitis NCTC 12261

45.283

99.065

0.449

Multiple sequence alignment