Detailed information NTG0256919

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: CVO91_RS02890
• Genome accession: NZ_CP024974
• Coordinates: 530159..530824 (+)
• Length: 221 a.a.
• NCBI ID: WP_002941737.1
• Uniprot ID: -
• Organism: Streptococcus suis strain CZ130302
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	531788..533483	530159..530824	flank	964

Gene organization within MGE regions

Location: 530159..533483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CVO91_RS02890 (CVO91_02890)	comFC/cflB	530159..530824 (+)	666	WP_002941737.1	ComF family protein	Machinery gene
CVO91_RS02895 (CVO91_02895)	raiA	530902..531444 (+)	543	WP_002941735.1	ribosome-associated translation inhibitor RaiA	-
CVO91_RS02900 (CVO91_02900)	tnpA	531605..532111 (+)	507	Protein_527	IS200/IS605 family transposase	-
CVO91_RS02905 (CVO91_02905)	-	532353..533483 (+)	1131	WP_100664749.1	ISAs1 family transposase	-

Sequence

Protein

• Length: 221 a.a.
• Molecular weight: 25788.71 Da
• Isoelectric Point: 8.6258

>NTDB_id=256919 CVO91_RS02890 WP_002941737.1 530159..530824(+) (comFC/cflB) [Streptococcus suis strain CZ130302]
MSNCLLCAQAMKNKTRFSDLIFFSKEKSGICEECFSTFEEIAEQHCPHCYKNGESESCKDCQYWQNQGKPVVHTALYRYN
QAMAHYFSRYKFQGDYVLRNIFAKKLRIALSQFPDYTIVPIPISQKRLLERGFNQVEGLLSATNIPYQSLLGKYESQKQS
SKNRAERLEAKQMFYLLDEKEVPEKILLFDDIYTTGATIQLAVELFMKIGRKEIKTFSLTR

Nucleotide

• Length: 666 bp

>NTDB_id=256919 CVO91_RS02890 WP_002941737.1 530159..530824(+) (comFC/cflB) [Streptococcus suis strain CZ130302]
ATGTCTAATTGTCTATTGTGCGCCCAAGCTATGAAAAATAAAACAAGATTTTCAGATCTCATCTTCTTTAGTAAAGAAAA
ATCGGGTATATGTGAAGAATGTTTTTCGACTTTTGAGGAAATAGCAGAGCAACACTGTCCACATTGTTATAAAAATGGAG
AATCGGAAAGTTGCAAGGATTGTCAGTACTGGCAGAATCAAGGGAAACCAGTTGTTCATACAGCTTTGTACCGATATAAT
CAAGCGATGGCACATTATTTTAGTCGCTACAAATTTCAAGGAGACTATGTTTTAAGAAATATTTTTGCTAAAAAGCTTAG
AATAGCGTTAAGCCAATTTCCTGACTACACAATTGTTCCCATACCAATTAGTCAAAAACGACTATTAGAACGCGGTTTTA
ATCAAGTGGAAGGACTTTTGAGTGCTACAAATATTCCCTATCAGTCCCTTCTTGGAAAGTATGAAAGCCAAAAACAATCA
TCTAAAAATCGTGCAGAGAGACTAGAAGCAAAACAGATGTTCTATCTATTAGATGAAAAAGAAGTGCCAGAAAAAATATT
ATTATTCGACGATATATATACAACAGGAGCCACAATCCAACTTGCTGTAGAACTTTTCATGAAAATTGGTAGGAAAGAAA
TCAAAACATTTTCACTAACACGATGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus mitis SK321	49.083	98.643	0.484
comFC/cflB	Streptococcus mitis NCTC 12261	49.083	98.643	0.484
comFC/cflB	Streptococcus pneumoniae TIGR4	48.624	98.643	0.48
comFC/cflB	Streptococcus pneumoniae Rx1	48.624	98.643	0.48
comFC/cflB	Streptococcus pneumoniae D39	48.624	98.643	0.48
comFC/cflB	Streptococcus pneumoniae R6	48.624	98.643	0.48