Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SAOUHSC_01850 Genome accession   NC_007795
Coordinates   1756346..1757335 (-) Length   329 a.a.
NCBI ID   YP_500354.1    Uniprot ID   Q2G295
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1751346..1762335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_01846 - 1752547..1754253 (-) 1707 YP_500351.1 acetate--CoA ligase -
  SAOUHSC_01847 - 1754422..1755054 (+) 633 YP_500352.1 hypothetical protein -
  SAOUHSC_01849 - 1755079..1756248 (+) 1170 YP_500353.1 acetoin utilization protein AcuC -
  SAOUHSC_01850 ccpA 1756346..1757335 (-) 990 YP_500354.1 catabolite control protein A Regulator
  SAOUHSC_01851 - 1757408..1757521 (-) 114 YP_500355.1 hypothetical protein -
  SAOUHSC_01852 - 1757875..1758966 (-) 1092 YP_500356.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  SAOUHSC_01853 - 1759427..1759531 (-) 105 YP_500357.1 hypothetical protein -
  SAOUHSC_01854 - 1759666..1761183 (-) 1518 YP_500358.1 hypothetical protein -
  SAOUHSC_01855 - 1761257..1761748 (-) 492 YP_500359.1 hypothetical protein -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36060.24 Da        Isoelectric Point: 5.5054

>NTDB_id=25491 SAOUHSC_01850 YP_500354.1 1756346..1757335(-) (ccpA) [Staphylococcus aureus subsp. aureus NCTC 8325]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=25491 SAOUHSC_01850 YP_500354.1 1756346..1757335(-) (ccpA) [Staphylococcus aureus subsp. aureus NCTC 8325]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGCCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCCAAAATGAAAGGCAATTTGCCAGATGCCATT
TTATGTATCAGCGACGAAGAAGCAATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGATTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(4-49)

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2G295

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.879

100

0.48
  ccpA Streptococcus gordonii str. Challis substr. CH1

47.112

100

0.471
  ccpA Streptococcus pneumoniae D39

46.201

100

0.462

Multiple sequence alignment