Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   SAOUHSC_01691 Genome accession   NC_007795
Coordinates   1601433..1603580 (-) Length   715 a.a.
NCBI ID   YP_500201.1    Uniprot ID   Q2FXY4
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1596433..1608580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_01687 - 1597626..1597754 (-) 129 YP_500197.1 hypothetical protein -
  SAOUHSC_01688 - 1597937..1599760 (-) 1824 YP_500198.1 GTP-binding protein LepA -
  SAOUHSC_01689 rpsT 1600106..1600357 (+) 252 YP_500199.1 30S ribosomal protein S20 -
  SAOUHSC_01690 holA 1600402..1601376 (-) 975 YP_500200.1 DNA polymerase III subunit delta -
  SAOUHSC_01691 comEC 1601433..1603580 (-) 2148 YP_500201.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  SAOUHSC_01692 - 1603639..1604070 (-) 432 YP_500202.1 hypothetical protein -
  SAOUHSC_01693 comEA 1604192..1604878 (-) 687 YP_500203.1 hypothetical protein Machinery gene
  SAOUHSC_01694 - 1604918..1605634 (-) 717 YP_500204.1 hypothetical protein -
  SAOUHSC_01695 - 1605637..1605990 (-) 354 YP_500205.1 hypothetical protein -
  SAOUHSC_01696 - 1605991..1606575 (-) 585 YP_500206.1 hypothetical protein -
  SAOUHSC_01697 - 1606565..1607134 (-) 570 YP_500207.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  SAOUHSC_01698 - 1607137..1607427 (-) 291 YP_500208.1 hypothetical protein -
  SAOUHSC_01699 - 1607431..1608237 (-) 807 YP_500209.1 shikimate 5-dehydrogenase -

Sequence

Protein


Download         Length: 715 a.a.        Molecular weight: 82864.47 Da        Isoelectric Point: 10.0035

>NTDB_id=25447 SAOUHSC_01691 YP_500201.1 1601433..1603580(-) (comEC) [Staphylococcus aureus subsp. aureus NCTC 8325]
MLSTFLFILLLYITYRKNKIVYAPISLFLIIFSAWYLHYSQQAIFNYINYIERNSQFNERAQVIQIQRQGSDTYKGRLSL
KNEIYPFFLTDKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLESNRSNLIEKHKQFIMNRIYDSGIKFPD
RIMALITGDVKEVNEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNLPLFVIKGITIIVLALFAQYTNYAPSAV
RAIIMTTLVLVITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQQLSKLQSLFIITFIAQLA
SFIVAIPSFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSHFSVP
KFNDWIFIVFIISVYYIFWLLAKRKYILVTFWTIIILTLLITFPTNSHHKITMLNVGQGDSILYEGGKNQNVLIDTGGKV
IDDTKQPSYSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKGYSSNTLMLLSKLSHKYNI
KLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKKVLLMGDASKNNESLLLKKYNLPEIDILKVGHHGS
KTSSSKEFIEMIKPKISLISSGKNNMYHLPNIEVVKRLQRIRSRIYNSQQNGQVTIDLDDNLKVDSSSYGNASGL

Nucleotide


Download         Length: 2148 bp        

>NTDB_id=25447 SAOUHSC_01691 YP_500201.1 1601433..1603580(-) (comEC) [Staphylococcus aureus subsp. aureus NCTC 8325]
GTGCTCTCTACATTTCTTTTCATTTTACTTTTGTATATTACTTATCGTAAAAATAAAATCGTTTATGCCCCTATTTCTCT
CTTTTTAATCATTTTCTCCGCATGGTATTTACATTATTCACAACAAGCAATATTTAATTATATCAATTATATTGAACGTA
ATTCTCAGTTTAATGAGCGTGCTCAAGTAATCCAAATTCAACGTCAAGGTAGTGACACATATAAAGGTAGGTTGAGTTTA
AAAAATGAAATATATCCTTTCTTTTTAACAGATAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGT
TAAAGGACAATTCAAAGTTAATGACAATAAGTTTGTAACTCTTAAATTACAAAGTATAGTTGTACAAAGCTGCCTAGAAT
CGAACCGGTCTAATTTAATTGAGAAACATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCGGAT
CGTATTATGGCATTGATTACTGGTGACGTAAAAGAAGTTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATA
TCATTTGCTGGCAGTTAGTGGCTCGCATATAGCTGCAATTGTATTTTTAATTTACCAACCTTTAAAACGATTAAATTTAC
CTTTATTTGTCATTAAAGGAATTACAATCATTGTATTAGCTTTATTTGCTCAATACACAAATTATGCACCTAGTGCTGTA
AGAGCTATAATAATGACAACTCTTGTACTGGTTATTACTAAGCAAATTAAAATAAAGGGTATTCAGCTATTAGCATTTGC
ATTTATAATTATGTTTATTTTAAATCCACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTA
TTATGCTACTTTTTCCTTTTTTACAGCAATTGTCAAAGTTACAATCATTATTCATAATTACGTTTATTGCACAATTAGCT
TCATTTATCGTTGCCATTCCAAGCTTTCATCAACTTCAATGGGTGGGATTTTTATCTAATTTGATTTTTGTACCGTACTA
TTCGATTATATTGTTTCCGCTATCTATTTTATTCTTTATTACAAGTCATTTTATTGTGGGATTAACGCCGCTAAATTACT
TGGTTGACCTAAGTTTTAATTTTCATGACTGGTTACTAGACCTATTCACAAGAATCAAGCAATCACATTTTTCTGTTCCC
AAGTTTAATGATTGGATATTTATAGTATTTATAATTTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATAT
ATTGGTTACGTTTTGGACTATAATTATTCTGACATTATTAATAACGTTTCCAACAAATTCACATCACAAAATTACAATGT
TAAATGTGGGGCAGGGAGACAGTATTTTATATGAAGGCGGTAAGAACCAAAATGTCTTGATTGATACAGGTGGGAAAGTG
ATTGATGATACTAAACAACCTAGTTATTCAATTTCTAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAATGA
ATTAGAGTATCTAATTTTAACACATCCACACAATGACCATATTGGTGAAGTGGAATATATTATTAGTCATATTAAAATTA
AACATATAGTGATATACAATAAGGGATATAGTAGTAATACATTGATGTTATTATCGAAATTAAGCCATAAGTACAACATT
AAACTTATGGATGTAAGACAAGTTAGTAGTTTTAAACTTGGAGATAGTAGTTTTCTATTTTTTGATAGTTTTATTCCAAA
TAGCCGAGATAAAAATGAGTATTCGATTATTACTATGATTACATATCAAAATAAAAAAGTTTTATTAATGGGCGATGCTA
GTAAAAATAATGAATCTTTACTACTAAAAAAATATAACTTGCCGGAGATTGATATTTTAAAAGTAGGACATCATGGGAGC
AAGACAAGTAGTTCTAAAGAATTTATAGAGATGATTAAGCCTAAAATAAGTTTGATTTCTTCTGGGAAGAACAATATGTA
TCATCTTCCTAATATAGAAGTTGTTAAACGATTGCAAAGGATTCGCAGTCGCATTTACAATAGTCAACAAAACGGTCAAG
TTACAATTGACTTAGATGATAATTTAAAAGTTGATTCAAGCTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterproScan.

Competence protein (Competence)

(165-423)

Metallo-beta-lactamase superfamily (Lactamase_B)

(456-661)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FXY4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Staphylococcus aureus N315

98.601

100

0.986
  comEC Staphylococcus aureus MW2

98.182

100

0.982

Multiple sequence alignment