Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   SAOUHSC_01693 Genome accession   NC_007795
Coordinates   1604192..1604878 (-) Length   228 a.a.
NCBI ID   YP_500203.1    Uniprot ID   Q2G299
Organism   Staphylococcus aureus subsp. aureus NCTC 8325     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1599192..1609878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAOUHSC_01689 rpsT 1600106..1600357 (+) 252 YP_500199.1 30S ribosomal protein S20 -
  SAOUHSC_01690 holA 1600402..1601376 (-) 975 YP_500200.1 DNA polymerase III subunit delta -
  SAOUHSC_01691 comEC 1601433..1603580 (-) 2148 YP_500201.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  SAOUHSC_01692 - 1603639..1604070 (-) 432 YP_500202.1 hypothetical protein -
  SAOUHSC_01693 comEA 1604192..1604878 (-) 687 YP_500203.1 hypothetical protein Machinery gene
  SAOUHSC_01694 - 1604918..1605634 (-) 717 YP_500204.1 hypothetical protein -
  SAOUHSC_01695 - 1605637..1605990 (-) 354 YP_500205.1 hypothetical protein -
  SAOUHSC_01696 - 1605991..1606575 (-) 585 YP_500206.1 hypothetical protein -
  SAOUHSC_01697 - 1606565..1607134 (-) 570 YP_500207.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  SAOUHSC_01698 - 1607137..1607427 (-) 291 YP_500208.1 hypothetical protein -
  SAOUHSC_01699 - 1607431..1608237 (-) 807 YP_500209.1 shikimate 5-dehydrogenase -
  SAOUHSC_01700 - 1608251..1609351 (-) 1101 YP_500210.1 GTP-binding protein YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25863.49 Da        Isoelectric Point: 9.3305

>NTDB_id=25449 SAOUHSC_01693 YP_500203.1 1604192..1604878(-) (comEA) [Staphylococcus aureus subsp. aureus NCTC 8325]
MVLLYQFLLRYKDFLTQWKLYILSAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=25449 SAOUHSC_01693 YP_500203.1 1604192..1604878(-) (comEA) [Staphylococcus aureus subsp. aureus NCTC 8325]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTCTAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2G299

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.238

99.561

0.978
  comEA Staphylococcus aureus N315

97.357

99.561

0.969

Multiple sequence alignment