Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilM   Type   Machinery gene
Locus tag   NP7_RS02740 Genome accession   NZ_CP024443
Coordinates   605512..606564 (+) Length   350 a.a.
NCBI ID   WP_100269605.1    Uniprot ID   A0A2D2LTC6
Organism   Moraxella osloensis strain NP7     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 600512..611564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP7_RS02730 (NP7_02725) - 601926..602444 (+) 519 WP_100269603.1 DUF6586 family protein -
  NP7_RS02735 (NP7_02730) - 602574..605300 (-) 2727 WP_100269604.1 penicillin-binding protein 1A -
  NP7_RS02740 (NP7_02735) pilM 605512..606564 (+) 1053 WP_100269605.1 pilus assembly protein PilM Machinery gene
  NP7_RS02745 (NP7_02740) - 606564..607235 (+) 672 WP_100269606.1 PilN domain-containing protein -
  NP7_RS02750 (NP7_02745) - 607238..607999 (+) 762 WP_199488893.1 type 4a pilus biogenesis protein PilO -
  NP7_RS02755 (NP7_02750) - 607986..608519 (+) 534 WP_100269607.1 pilus assembly protein PilP -
  NP7_RS02760 (NP7_02755) pilQ 608537..610897 (+) 2361 WP_100269608.1 type IV pilus secretin family protein -
  NP7_RS02765 (NP7_02760) - 611006..611542 (+) 537 WP_100269609.1 shikimate kinase -

Sequence

Protein


Download         Length: 350 a.a.        Molecular weight: 38280.62 Da        Isoelectric Point: 4.5743

>NTDB_id=253554 NP7_RS02740 WP_100269605.1 605512..606564(+) (pilM) [Moraxella osloensis strain NP7]
MRLFTKNNKLVVGVDITTTAIKMVEITRQQGLFHLRNYGIEPLPRGAVVDKNIVDIDAVSDALARLSRGSGFSSKHIATA
VSGSSVISKIIEMEADLTELERESRIRLDADQYIPYPLSEVNLDFEVIGPSATPDMCKVLLVASRTENVDQRVDAGALAG
LDTKIVDVEAYAVERAFQLMVDSLPGQPQHVALIDIGHSQTTLYIAKDGEFVYSREQLFGGAQLTESIQSRYGLTFEEAM
INKRTLSLPDDYYTDVLMPFLDAIVQQITRSLQFYFSSSQNSQVDYILLGGGSASIAGLASMVEQKLGTRTGIANAFSNM
TINNHINTELLIMDAPSLIAACGLALRSFD

Nucleotide


Download         Length: 1053 bp        

>NTDB_id=253554 NP7_RS02740 WP_100269605.1 605512..606564(+) (pilM) [Moraxella osloensis strain NP7]
GTGAGGTTATTTACAAAAAACAACAAGCTAGTCGTTGGGGTAGATATCACCACCACTGCGATAAAAATGGTTGAAATAAC
ACGGCAGCAAGGTCTATTTCACTTAAGAAATTACGGCATTGAACCGTTACCCCGCGGTGCAGTTGTGGATAAAAATATTG
TAGATATTGACGCGGTCAGTGACGCCCTCGCAAGATTATCCCGTGGTAGCGGTTTTTCTAGTAAACATATCGCGACAGCC
GTATCTGGGTCTTCGGTTATTAGCAAAATTATTGAGATGGAAGCGGATCTCACAGAGCTTGAAAGAGAATCTCGTATCCG
TCTGGATGCTGACCAATATATTCCCTATCCTTTATCCGAAGTGAATCTAGATTTTGAAGTGATAGGGCCTTCAGCCACGC
CTGATATGTGTAAGGTATTGTTGGTTGCCTCTCGCACTGAAAACGTCGACCAACGTGTCGATGCGGGCGCTTTAGCGGGA
CTGGATACTAAAATTGTGGATGTAGAGGCTTACGCAGTTGAACGCGCTTTTCAATTGATGGTCGATAGCTTGCCAGGTCA
ACCTCAGCATGTAGCACTCATTGATATCGGGCATAGCCAAACCACGCTTTATATTGCAAAAGACGGGGAGTTTGTATACA
GCCGTGAACAGCTTTTTGGTGGCGCCCAGTTAACTGAAAGTATTCAAAGCCGTTATGGTTTGACGTTCGAGGAGGCGATG
ATTAATAAGCGCACCCTGTCATTGCCAGATGATTACTATACGGATGTATTAATGCCATTTTTAGATGCCATTGTGCAGCA
AATCACCCGCTCGCTGCAGTTTTATTTTTCATCAAGCCAAAATAGCCAAGTAGACTATATTTTGTTGGGTGGGGGTAGTG
CCAGCATTGCGGGTCTAGCAAGCATGGTTGAACAAAAACTTGGTACCCGCACAGGTATTGCCAATGCATTTTCAAATATG
ACGATTAATAACCATATCAACACTGAATTACTGATTATGGACGCGCCAAGCTTAATAGCGGCTTGTGGCTTGGCGTTACG
GAGTTTTGATTAA

Domains

Predicted by InterproScan.

Type IV pilus assembly protein PilM; (PilM_2)

(13-349)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D2LTC6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilM Acinetobacter baumannii D1279779

51.852

100

0.52
  comM Acinetobacter nosocomialis M2

50.997

100

0.511
  comM Acinetobacter baylyi ADP1

48.433

100

0.486
  pilM Legionella pneumophila strain ERS1305867

42.776

100

0.431

Multiple sequence alignment