Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KSH_RS01270 Genome accession   NZ_CP024180
Coordinates   273687..274073 (+) Length   128 a.a.
NCBI ID   WP_050324978.1    Uniprot ID   A0A9X1UQ18
Organism   Moraxella osloensis strain KSH     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 268687..279073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KSH_RS01265 (KSH_01265) - 271947..273197 (-) 1251 WP_198510969.1 efflux RND transporter periplasmic adaptor subunit -
  KSH_RS01270 (KSH_01270) pilG 273687..274073 (+) 387 WP_050324978.1 twitching motility response regulator PilG Regulator
  KSH_RS01275 (KSH_01275) - 274320..274682 (+) 363 WP_099807513.1 PleD family two-component system response regulator -
  KSH_RS01280 (KSH_01280) - 274688..275224 (+) 537 WP_099807514.1 chemotaxis protein CheW -
  KSH_RS01285 (KSH_01285) - 275644..276678 (+) 1035 Protein_246 methyl-accepting chemotaxis protein -
  KSH_RS01290 (KSH_01290) - 276775..276990 (+) 216 WP_099807516.1 hypothetical protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14121.17 Da        Isoelectric Point: 4.6115

>NTDB_id=252795 KSH_RS01270 WP_050324978.1 273687..274073(+) (pilG) [Moraxella osloensis strain KSH]
MDANFEGLKVMIIDDSKTIRRTAETLLAKAGCEVTTAVDGFDALAKIADTNPDLIFVDIMMPRLDGYQTCSLIKNNADFA
ATPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKEELFDTIERHRPAS

Nucleotide


Download         Length: 387 bp        

>NTDB_id=252795 KSH_RS01270 WP_050324978.1 273687..274073(+) (pilG) [Moraxella osloensis strain KSH]
ATGGATGCAAATTTTGAAGGCCTAAAAGTCATGATTATTGACGATTCAAAAACCATTCGTCGTACCGCAGAGACGTTACT
TGCCAAAGCAGGCTGTGAGGTGACTACTGCCGTTGATGGCTTTGATGCGTTGGCAAAAATTGCGGATACCAACCCAGATT
TGATTTTTGTCGATATCATGATGCCACGCCTCGACGGTTATCAGACTTGTTCACTAATCAAAAACAACGCAGATTTTGCT
GCCACGCCCGTGATTATGCTGTCATCAAAAGATGGCTTGTTTGATAAAGCGCGCGGTCGTATCGTCGGCTCAGATGAGTA
CTTGACCAAACCATTTAGTAAAGAAGAGCTATTTGATACCATTGAACGTCATCGTCCTGCGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

96.875

0.711
  vicR Streptococcus mutans UA159

43.966

90.625

0.398
  chiS Vibrio cholerae strain A1552

37.6

97.656

0.367
  pilH Synechocystis sp. PCC 6803

41.228

89.063

0.367

Multiple sequence alignment