Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   YHS_RS01195 Genome accession   NZ_CP024176
Coordinates   264590..264976 (+) Length   128 a.a.
NCBI ID   WP_050324978.1    Uniprot ID   A0A9X1UQ18
Organism   Moraxella osloensis strain YHS     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 259590..269976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  YHS_RS01190 (YHS_01195) - 262850..264100 (-) 1251 WP_198510456.1 efflux RND transporter periplasmic adaptor subunit -
  YHS_RS01195 (YHS_01200) pilG 264590..264976 (+) 387 WP_050324978.1 twitching motility response regulator PilG Regulator
  YHS_RS01200 (YHS_01205) - 265223..265585 (+) 363 WP_050324979.1 response regulator -
  YHS_RS01205 (YHS_01210) - 265591..266127 (+) 537 WP_065254123.1 chemotaxis protein CheW -
  YHS_RS01210 (YHS_01215) - 266547..267581 (+) 1035 Protein_231 methyl-accepting chemotaxis protein -
  YHS_RS12545 - 267678..267935 (+) 258 WP_157796993.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14121.17 Da        Isoelectric Point: 4.6115

>NTDB_id=252777 YHS_RS01195 WP_050324978.1 264590..264976(+) (pilG) [Moraxella osloensis strain YHS]
MDANFEGLKVMIIDDSKTIRRTAETLLAKAGCEVTTAVDGFDALAKIADTNPDLIFVDIMMPRLDGYQTCSLIKNNADFA
ATPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKEELFDTIERHRPAS

Nucleotide


Download         Length: 387 bp        

>NTDB_id=252777 YHS_RS01195 WP_050324978.1 264590..264976(+) (pilG) [Moraxella osloensis strain YHS]
ATGGATGCAAATTTTGAAGGCCTAAAAGTCATGATTATTGACGACTCAAAAACCATTCGTCGTACCGCAGAGACGTTACT
TGCCAAAGCAGGCTGTGAGGTGACTACTGCCGTTGATGGCTTTGATGCGTTGGCAAAAATTGCGGATACCAACCCAGATT
TGATTTTTGTCGATATCATGATGCCACGCCTCGACGGTTATCAGACTTGTTCACTAATCAAAAACAACGCAGATTTTGCT
GCCACGCCCGTGATTATGCTGTCATCAAAAGATGGCTTGTTTGATAAAGCGCGCGGTCGTATCGTCGGCTCAGATGAGTA
CTTGACCAAACCATTTAGTAAAGAAGAGCTATTTGATACCATTGAACGTCATCGTCCTGCGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

96.875

0.711
  vicR Streptococcus mutans UA159

43.966

90.625

0.398
  chiS Vibrio cholerae strain A1552

37.6

97.656

0.367
  pilH Synechocystis sp. PCC 6803

41.228

89.063

0.367

Multiple sequence alignment