Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   DEH83_RS04915 Genome accession   NZ_CP029207
Coordinates   970818..971258 (-) Length   146 a.a.
NCBI ID   WP_037598388.1    Uniprot ID   -
Organism   Streptococcus constellatus strain TCV107     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 965818..976258
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS04900 (DEH83_04895) argR 967061..967501 (+) 441 WP_255777212.1 arginine repressor -
  DEH83_RS04905 (DEH83_04900) hexA 967664..970222 (+) 2559 WP_255777213.1 DNA mismatch repair protein MutS Machinery gene
  DEH83_RS04910 (DEH83_04905) - 970363..970821 (-) 459 WP_255777214.1 DUF3021 domain-containing protein -
  DEH83_RS04915 (DEH83_04910) brsR 970818..971258 (-) 441 WP_037598388.1 LytTR family DNA-binding domain-containing protein Regulator
  DEH83_RS04920 (DEH83_04915) hexB 971505..973451 (+) 1947 WP_006269779.1 DNA mismatch repair endonuclease MutL Machinery gene
  DEH83_RS04925 (DEH83_04920) - 973780..974289 (-) 510 WP_003071502.1 helix-turn-helix domain-containing protein -
  DEH83_RS04930 (DEH83_04925) ruvA 974451..975041 (+) 591 WP_255777231.1 Holliday junction branch migration protein RuvA Machinery gene
  DEH83_RS04935 (DEH83_04930) - 975053..975607 (+) 555 WP_039677797.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16837.52 Da        Isoelectric Point: 5.6444

>NTDB_id=252109 DEH83_RS04915 WP_037598388.1 970818..971258(-) (brsR) [Streptococcus constellatus strain TCV107]
MKVQLHIDEKFSEEKVVIEAPALSDAIQQLLVFTQHLGGTKTIRAKKEEEIYLLDTAEIQRIYTENRQVWVETATDTYLL
GLPLYQVLELLPTDFLQISQSEIINIEHIDHLKLTGSGLIQIAMKNGQITYSSRRYLKVIKEKLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=252109 DEH83_RS04915 WP_037598388.1 970818..971258(-) (brsR) [Streptococcus constellatus strain TCV107]
ATGAAAGTTCAATTGCATATTGATGAAAAATTTTCAGAAGAAAAGGTTGTCATTGAAGCACCAGCTTTATCGGATGCTAT
TCAACAGTTGCTGGTTTTCACTCAACATCTCGGTGGCACTAAAACCATTCGAGCCAAAAAAGAGGAGGAGATTTACCTAT
TAGATACTGCTGAAATTCAGAGAATTTACACTGAAAACCGCCAAGTTTGGGTTGAAACAGCGACAGACACTTATCTTTTA
GGGCTTCCACTTTATCAAGTTTTGGAATTGCTTCCCACTGATTTTCTACAGATTTCCCAATCTGAAATCATTAACATCGA
ACATATCGATCATCTGAAATTGACTGGTAGTGGTCTGATTCAGATTGCAATGAAAAACGGTCAGATAACTTATTCATCTC
GTCGTTATCTCAAAGTCATAAAGGAGAAATTACAGCTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.986

100

0.37