Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | FORC73_RS12460 | Genome accession | NZ_CP024082 |
| Coordinates | 2660735..2661379 (+) | Length | 214 a.a. |
| NCBI ID | WP_001188318.1 | Uniprot ID | A0A085QXE6 |
| Organism | Vibrio cholerae strain FORC_073 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2655735..2666379
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC73_RS12445 (FORC73_2351) | - | 2656322..2657761 (-) | 1440 | WP_032481367.1 | PilN domain-containing protein | - |
| FORC73_RS12450 (FORC73_2352) | csrD | 2657774..2659732 (-) | 1959 | WP_000216145.1 | RNase E specificity factor CsrD | - |
| FORC73_RS12455 (FORC73_2353) | ssb | 2659910..2660443 (-) | 534 | WP_000168287.1 | single-stranded DNA-binding protein | Machinery gene |
| FORC73_RS12460 (FORC73_2354) | qstR | 2660735..2661379 (+) | 645 | WP_001188318.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| FORC73_RS12465 (FORC73_2355) | galU | 2661552..2662424 (+) | 873 | WP_001920788.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| FORC73_RS12470 (FORC73_2356) | uvrA | 2662580..2665402 (+) | 2823 | WP_000357696.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24722.55 Da Isoelectric Point: 9.6461
>NTDB_id=251748 FORC73_RS12460 WP_001188318.1 2660735..2661379(+) (qstR) [Vibrio cholerae strain FORC_073]
MQRANYARTIYLLTTQPKTLHPGVQAAIEQLNLPVPVIEPERLLREYQSDKHKILLLDHAENGLIRQQLGPLKLTSPYFE
TILFNVEKRLRTEDLLTFGNLKGLFYANEDTGFIAHGLGEIINGQNWLPRHVSSQLLHYYRYAFQSHQVQATVDLTAREI
QILRCLQTGASNMQIAENLFISEFTVKSHLYQIFKKLNVKNRVKAIAWVNQNLL
MQRANYARTIYLLTTQPKTLHPGVQAAIEQLNLPVPVIEPERLLREYQSDKHKILLLDHAENGLIRQQLGPLKLTSPYFE
TILFNVEKRLRTEDLLTFGNLKGLFYANEDTGFIAHGLGEIINGQNWLPRHVSSQLLHYYRYAFQSHQVQATVDLTAREI
QILRCLQTGASNMQIAENLFISEFTVKSHLYQIFKKLNVKNRVKAIAWVNQNLL
Nucleotide
Download Length: 645 bp
>NTDB_id=251748 FORC73_RS12460 WP_001188318.1 2660735..2661379(+) (qstR) [Vibrio cholerae strain FORC_073]
ATGCAACGAGCCAACTATGCACGCACGATTTATTTATTAACGACACAGCCGAAAACGTTACATCCCGGAGTTCAAGCCGC
CATTGAGCAATTGAACCTGCCCGTCCCGGTGATTGAACCAGAACGCTTATTGCGCGAGTATCAATCCGATAAACACAAAA
TATTGTTGCTCGACCATGCGGAAAATGGCCTGATTCGCCAGCAATTGGGTCCCCTAAAGCTTACCAGCCCGTACTTCGAA
ACCATCTTGTTTAATGTCGAGAAACGGTTAAGAACAGAAGATCTGCTCACTTTTGGCAACCTCAAAGGTCTGTTTTATGC
CAATGAAGACACAGGCTTTATTGCCCACGGTCTTGGGGAGATCATTAATGGCCAAAACTGGCTACCTCGCCATGTCAGCA
GTCAGTTGCTGCATTACTATCGTTACGCTTTCCAAAGCCATCAAGTTCAAGCCACGGTCGATTTGACTGCACGTGAAATT
CAGATCCTGCGCTGTTTACAAACTGGCGCATCGAATATGCAAATCGCTGAGAATTTATTTATTAGTGAGTTCACGGTGAA
ATCGCATCTTTATCAGATATTTAAAAAGCTAAACGTGAAAAATCGAGTCAAAGCGATCGCTTGGGTTAATCAAAATTTAC
TGTAA
ATGCAACGAGCCAACTATGCACGCACGATTTATTTATTAACGACACAGCCGAAAACGTTACATCCCGGAGTTCAAGCCGC
CATTGAGCAATTGAACCTGCCCGTCCCGGTGATTGAACCAGAACGCTTATTGCGCGAGTATCAATCCGATAAACACAAAA
TATTGTTGCTCGACCATGCGGAAAATGGCCTGATTCGCCAGCAATTGGGTCCCCTAAAGCTTACCAGCCCGTACTTCGAA
ACCATCTTGTTTAATGTCGAGAAACGGTTAAGAACAGAAGATCTGCTCACTTTTGGCAACCTCAAAGGTCTGTTTTATGC
CAATGAAGACACAGGCTTTATTGCCCACGGTCTTGGGGAGATCATTAATGGCCAAAACTGGCTACCTCGCCATGTCAGCA
GTCAGTTGCTGCATTACTATCGTTACGCTTTCCAAAGCCATCAAGTTCAAGCCACGGTCGATTTGACTGCACGTGAAATT
CAGATCCTGCGCTGTTTACAAACTGGCGCATCGAATATGCAAATCGCTGAGAATTTATTTATTAGTGAGTTCACGGTGAA
ATCGCATCTTTATCAGATATTTAAAAAGCTAAACGTGAAAAATCGAGTCAAAGCGATCGCTTGGGTTAATCAAAATTTAC
TGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio cholerae strain A1552 |
98.598 |
100 |
0.986 |
| qstR | Vibrio campbellii strain DS40M4 |
52.336 |
100 |
0.523 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
51.628 |
100 |
0.519 |