Detailed information NTG0251134

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: BS636_RS06555
• Genome accession: NZ_CP024011
• Coordinates: 1378507..1379928 (-)
• Length: 473 a.a.
• NCBI ID: WP_416202911.1
• Uniprot ID: -
• Organism: Acinetobacter sp. LoGeW2-3
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1373507..1384928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS636_RS06540 (BS636_06540)	lptG	1374542..1375612 (+)	1071	WP_099338054.1	LPS export ABC transporter permease LptG	-
BS636_RS06545 (BS636_06545)	gpmI	1375737..1377287 (+)	1551	WP_099338055.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
BS636_RS06550 (BS636_06550)	-	1377309..1378481 (+)	1173	WP_099338056.1	S41 family peptidase	-
BS636_RS06555 (BS636_06555)	pilR	1378507..1379928 (-)	1422	WP_416202911.1	sigma-54-dependent transcriptional regulator	Regulator
BS636_RS06560 (BS636_06560)	pilS	1379950..1381515 (-)	1566	WP_099338058.1	sensor histidine kinase	Regulator
BS636_RS06565 (BS636_06565)	-	1381565..1382200 (-)	636	WP_004896390.1	response regulator	-
BS636_RS06570 (BS636_06570)	-	1382422..1383477 (+)	1056	WP_150128994.1	serine hydrolase	-
BS636_RS06575 (BS636_06575)	thrC	1383545..1384684 (-)	1140	WP_099338060.1	threonine synthase	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 53740.72 Da
• Isoelectric Point: 6.2027

>NTDB_id=251134 BS636_RS06555 WP_416202911.1 1378507..1379928(-) (pilR) [Acinetobacter sp. LoGeW2-3]
MVEQQPLVLLVDDEEDLCTLMQMSLMRMGIRTHIAHRLEDAKKRLADYQYDACLTDLNLPDGNGLQLLEFISEHHPSLPV
AVLTAYGNMDIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYQSSQQDTLEYKMLIGQSKPIQQLRTTLHKIARS
QAPVFITGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPAELMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKRIRPLGSDTEIDVDFRVISASHQDLEAQVQQGKFRQDLFFRIHVMDLVLPPLRERGHDILL
LAEHFIQKICQEWQIPVKRLTERSKEQLLAQYYPGNVRELRNIIERAITLSDEDMIDIQHLQTAPLRQSFITSEITSNSV
PESNHNTDTFMVPKKLPEEGLELYIEKIEKEILLNALNQTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDEEE

Nucleotide

• Length: 1422 bp

>NTDB_id=251134 BS636_RS06555 WP_416202911.1 1378507..1379928(-) (pilR) [Acinetobacter sp. LoGeW2-3]
ATTGTGGAACAACAACCACTGGTACTGTTGGTCGATGATGAAGAGGATCTCTGCACACTGATGCAGATGTCACTGATGCG
TATGGGAATCCGCACGCATATCGCCCACCGTCTGGAGGATGCCAAAAAACGTCTAGCAGATTATCAGTATGATGCCTGTC
TGACCGACCTGAATCTGCCTGATGGTAATGGCTTGCAGTTACTGGAGTTTATCAGTGAACATCATCCTTCCCTACCGGTC
GCTGTCTTAACTGCCTATGGCAATATGGATATTGCCATTGCTGCACTCAAAGCAGGTGCCTTTGATTTTGTCAGCAAGCC
AATCAATCAGAAACATCTGGAACAGTTACTACAAAAGGCACTGAATAAGCCTGTTGATTACCAATCCAGTCAGCAAGATA
CCCTAGAATATAAAATGCTGATTGGCCAATCCAAGCCGATTCAGCAGCTGCGCACAACCTTACATAAAATTGCCCGCTCC
CAAGCCCCCGTGTTTATTACCGGTGAATCTGGTACGGGTAAGGAAGTGGTGGCGAATCTGGTCCATCGCCTGAGTAACCG
TAGTGAAGGTCCCTTTATTGCCATTAACTGTGGTGCTATTCCAGCTGAACTGATGGAAAGTGAGCTGTTCGGGCATAAGA
AAGGCAGTTTTACTGGTGCAACGCAGGACAAACAGGGTCTAATCCAGTCTGCACATGGTGGCAGCCTATTCTTGGATGAA
ATTGCTGAACTACCACTGAGTATGCAGGTGAAACTGCTACGCGCAGTACAGGAAAAACGGATTCGTCCACTGGGGTCAGA
TACAGAAATTGATGTCGATTTTCGTGTGATCAGTGCCAGTCATCAGGATCTGGAAGCACAGGTCCAGCAAGGGAAATTCC
GTCAGGATCTGTTCTTCCGGATTCATGTCATGGATCTGGTACTGCCACCACTGCGTGAGCGTGGTCATGATATTCTACTG
CTGGCTGAACACTTCATTCAGAAGATTTGTCAGGAATGGCAAATTCCAGTGAAACGCCTGACTGAACGTAGTAAGGAGCA
GTTACTGGCTCAATACTATCCTGGGAATGTCCGTGAACTGCGTAATATCATTGAACGGGCGATTACTCTTAGCGATGAAG
ATATGATTGATATTCAGCATCTGCAAACGGCACCTTTACGTCAGAGTTTCATAACTTCAGAAATTACATCCAATTCAGTT
CCCGAATCAAATCATAATACTGACACTTTTATGGTGCCGAAAAAACTGCCTGAAGAAGGGCTTGAACTGTATATCGAGAA
GATCGAGAAAGAAATTTTGCTGAATGCCCTGAATCAGACCCATTGGAACCGGACTTTAGCTGCAAAAAAACTCGGCATGT
CTTTCCGCTCACTACGTTATCGTCTGAAGAAATTTGGGCTCGATACCGATGAAGAAGAATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.214	100	0.748
pilR	Pseudomonas aeruginosa PAK	48.188	99.154	0.478