Detailed information NTG0251044

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: CRN64_RS06635
• Genome accession: NZ_CP023970
• Coordinates: 1381273..1381782 (-)
• Length: 169 a.a.
• NCBI ID: WP_002461102.1
• Uniprot ID: A0A133Q7N8
• Organism: Staphylococcus lugdunensis strain FDAARGOS_381
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1376273..1386782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CRN64_RS06595 (CRN64_06595)	tscT	1376738..1377040 (-)	303	WP_002492064.1	type II toxin-antitoxin system toxin TscT	-
CRN64_RS06600 (CRN64_06600)	-	1377040..1377459 (-)	420	WP_002492019.1	hypothetical protein	-
CRN64_RS12585	-	1377449..1377607 (-)	159	WP_002492040.1	hypothetical protein	-
CRN64_RS06605 (CRN64_06605)	-	1377624..1377896 (-)	273	WP_002492070.1	helix-turn-helix domain-containing protein	-
CRN64_RS06610 (CRN64_06610)	-	1377897..1378118 (-)	222	WP_002492076.1	helix-turn-helix transcriptional regulator	-
CRN64_RS06615 (CRN64_06615)	-	1378290..1378862 (+)	573	WP_002459648.1	helix-turn-helix domain-containing protein	-
CRN64_RS06620 (CRN64_06620)	-	1378889..1379581 (+)	693	WP_002459649.1	hypothetical protein	-
CRN64_RS06625 (CRN64_06625)	-	1379618..1380838 (+)	1221	WP_002492008.1	site-specific integrase	-
CRN64_RS06630 (CRN64_06630)	rpsR	1380984..1381226 (-)	243	WP_002461103.1	30S ribosomal protein S18	-
CRN64_RS06635 (CRN64_06635)	ssbA	1381273..1381782 (-)	510	WP_002461102.1	single-stranded DNA-binding protein	Machinery gene
CRN64_RS06640 (CRN64_06640)	rpsF	1381804..1382100 (-)	297	WP_002461101.1	30S ribosomal protein S6	-
CRN64_RS06645 (CRN64_06645)	-	1382418..1383203 (+)	786	WP_002461100.1	GH25 family lysozyme	-
CRN64_RS06650 (CRN64_06650)	-	1383265..1383456 (+)	192	WP_002479240.1	hypothetical protein	-
CRN64_RS06655 (CRN64_06655)	ychF	1383696..1384793 (-)	1098	WP_002479239.1	redox-regulated ATPase YchF	-
CRN64_RS06660 (CRN64_06660)	-	1384793..1385008 (-)	216	WP_002479238.1	DUF951 domain-containing protein	-
CRN64_RS06665 (CRN64_06665)	-	1385026..1385907 (-)	882	WP_002479237.1	mechanosensitive ion channel family protein	-

Sequence

Protein

• Length: 169 a.a.
• Molecular weight: 18747.34 Da
• Isoelectric Point: 4.9366

>NTDB_id=251044 CRN64_RS06635 WP_002461102.1 1381273..1381782(-) (ssbA) [Staphylococcus lugdunensis strain FDAARGOS_381]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQAENVNNYLNKGSLAGVDGRLQSR
SYENQEGRRIFVTEVVCDSVQFLEPKNAQHGGQRSQNNEFQDYGQGFGGQQSGQNTSYNNNNASKSNQNDNPFANANGPI
DISDDDLPF

Nucleotide

• Length: 510 bp

>NTDB_id=251044 CRN64_RS06635 WP_002461102.1 1381273..1381782(-) (ssbA) [Staphylococcus lugdunensis strain FDAARGOS_381]
ATGTTAAATAGAGTTGTATTAGTAGGTCGTTTAACCAAAGATCCAGAATACAGAACTACTCCCTCAGGCGTAAGTGTAGC
GACTTTTACTTTAGCTGTTAATCGTACATTCACGAATGCTCAAGGGGAACGCGAAGCTGACTTTATCAACTGTGTTGTTT
TTAGAAGACAAGCAGAAAACGTTAATAACTATTTAAATAAAGGTAGTTTAGCCGGCGTTGATGGTCGCTTACAATCACGT
AGTTATGAAAATCAAGAAGGTCGTCGTATTTTTGTTACCGAAGTTGTATGCGACAGTGTTCAATTCCTTGAACCTAAGAA
CGCACAACATGGTGGCCAACGTTCACAAAACAATGAATTCCAAGACTATGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAATACGTCATATAATAACAATAACGCATCAAAATCTAATCAAAACGATAATCCATTTGCCAATGCTAATGGACCGATT
GATATTAGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.896	100	0.675
ssb	Latilactobacillus sakei subsp. sakei 23K	54.651	100	0.556
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	62.722	0.373
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.361