Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   BAALB65_RS19745 Genome accession   NZ_CP029069
Coordinates   3968222..3969418 (-) Length   398 a.a.
NCBI ID   WP_014419339.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ALB65     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3963222..3974418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAALB65_RS19725 (BAALB65_19725) - 3963373..3964380 (-) 1008 WP_109567343.1 ThiF family adenylyltransferase -
  BAALB65_RS19730 (BAALB65_19730) - 3964612..3966030 (-) 1419 WP_072176786.1 HAMP domain-containing sensor histidine kinase -
  BAALB65_RS19735 (BAALB65_19735) - 3966027..3966710 (-) 684 WP_095060437.1 response regulator transcription factor -
  BAALB65_RS19740 (BAALB65_19740) - 3966924..3967835 (+) 912 WP_109567344.1 PepSY domain-containing protein -
  BAALB65_RS19745 (BAALB65_19745) htrA 3968222..3969418 (-) 1197 WP_014419339.1 S1C family serine protease Regulator
  BAALB65_RS19750 (BAALB65_19750) vicX 3969505..3970299 (-) 795 WP_004393110.1 MBL fold metallo-hydrolase Regulator
  BAALB65_RS19755 (BAALB65_19755) yycI 3970314..3971153 (-) 840 WP_014419340.1 two-component system regulatory protein YycI -
  BAALB65_RS19760 (BAALB65_19760) yycH 3971140..3972498 (-) 1359 WP_015418614.1 two-component system activity regulator YycH -
  BAALB65_RS19765 (BAALB65_19765) walK 3972488..3974323 (-) 1836 WP_004393106.1 cell wall metabolism sensor histidine kinase WalK -

Sequence


Protein


Download         Length: 398 a.a.        Molecular weight: 42575.41 Da        Isoelectric Point: 8.2633

>NTDB_id=250167 BAALB65_RS19745 WP_014419339.1 3968222..3969418(-) (htrA) [Bacillus amyloliquefaciens strain ALB65]
MDYNRDDEQYASEQPRRSKRGYFLSSLIGVIVGAALMAFLLPYWTGGDHGESSKSTSQRLGSEQVKTVNVNVNDAVTNMV
SRVSDSVVGVLNIQKTDIWGEGGEAGSGSGVIYKKNGNTSYIVTNHHVIAGATEIEISLKDGSRVPAELIGSDRLMDLAV
LKVKSDKIKSAAQFGNSDQVKVGEPVIAIGNPLGLEFAGSVTQGIISGTERAVPVDSNGDGQPDWNAEVLQTDAAINPGN
SGGALMDISGKVVGINSMKIAESAVEGIGLSIPSKLVIPVIQDLEKYGEVRRPFLGIEMKSLTDIASYHWSQTLKLPKGV
KTGAVIMGVDAFSPAGKAGLKKLDVITGFDGHKVNDVVDLRERLYRKKIGDRVNITFYRSGKKKTAEVKLTEADRLQK

Nucleotide


Download         Length: 1197 bp        

>NTDB_id=250167 BAALB65_RS19745 WP_014419339.1 3968222..3969418(-) (htrA) [Bacillus amyloliquefaciens strain ALB65]
GTGGATTATAATCGCGATGATGAACAGTACGCCTCCGAACAGCCCCGCCGCAGCAAGAGAGGGTACTTTCTATCAAGTCT
GATCGGCGTCATCGTCGGGGCCGCGCTCATGGCTTTCCTGCTGCCGTACTGGACAGGCGGAGACCATGGAGAAAGCAGCA
AAAGCACCAGCCAGCGTCTCGGCAGCGAACAGGTGAAAACAGTCAACGTCAATGTCAATGATGCTGTCACGAATATGGTC
AGCCGTGTATCAGATTCGGTAGTCGGTGTTCTCAATATCCAAAAGACCGATATTTGGGGAGAGGGCGGCGAAGCGGGAAG
CGGATCGGGCGTCATTTACAAAAAGAACGGAAACACTTCTTATATCGTAACCAATCACCATGTCATTGCAGGTGCGACTG
AAATTGAGATCAGCCTGAAGGATGGCTCACGCGTGCCTGCTGAGCTGATCGGGAGCGACCGTCTGATGGATCTCGCCGTG
CTGAAGGTGAAGTCTGATAAAATCAAATCGGCCGCCCAGTTCGGCAATTCTGATCAAGTCAAAGTCGGAGAACCGGTCAT
TGCGATCGGAAATCCGCTCGGGCTTGAATTTGCGGGATCAGTGACACAGGGGATCATTTCAGGCACGGAAAGGGCAGTGC
CCGTTGACTCAAACGGCGACGGACAGCCGGATTGGAATGCGGAAGTGCTGCAGACCGACGCCGCGATTAACCCCGGCAAC
AGCGGAGGCGCTTTGATGGATATATCGGGCAAGGTGGTCGGCATCAACTCAATGAAGATCGCTGAATCCGCCGTTGAAGG
AATCGGCCTGTCCATCCCGTCAAAGCTTGTCATTCCCGTTATTCAGGATTTAGAAAAATACGGAGAAGTCAGACGGCCTT
TCCTCGGTATTGAGATGAAATCCTTAACGGATATTGCGAGCTACCATTGGAGCCAGACGCTGAAACTTCCGAAAGGCGTT
AAAACCGGGGCGGTCATTATGGGTGTCGATGCGTTTTCACCGGCCGGAAAAGCGGGTTTGAAAAAGCTCGACGTGATCAC
CGGGTTCGACGGACATAAGGTCAATGACGTTGTGGATCTCCGTGAGCGCCTGTATCGCAAAAAGATCGGCGACCGTGTGA
ACATCACGTTTTACCGTTCGGGAAAGAAAAAAACAGCGGAAGTCAAACTGACAGAAGCGGATCGATTACAGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

43.434

99.497

0.432

  htrA Streptococcus mitis NCTC 12261

41.451

96.985

0.402

  htrA Streptococcus gordonii str. Challis substr. CH1

40.665

98.241

0.399