Detailed information NTG0249362

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: C5B40_RS25525
• Genome accession: NZ_CP028917
• Coordinates: 5333778..5335790 (-)
• Length: 670 a.a.
• NCBI ID: WP_003104590.1
• Uniprot ID: P72174
• Organism: Pseudomonas aeruginosa strain JB2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5328778..5340790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5B40_RS25510	-	5330168..5331088 (-)	921	WP_003091419.1	LysR family transcriptional regulator	-
C5B40_RS25515	-	5331191..5332225 (+)	1035	WP_003091421.1	HlyD family secretion protein	-
C5B40_RS25520	-	5332275..5333774 (+)	1500	WP_003130539.1	MDR family MFS transporter	-
C5B40_RS25525	uvrB	5333778..5335790 (-)	2013	WP_003104590.1	excinuclease ABC subunit UvrB	Machinery gene
C5B40_RS25530	-	5335978..5337174 (+)	1197	WP_003104588.1	amino acid aminotransferase	-
C5B40_RS25540	comEA/comE1	5337391..5337720 (-)	330	WP_024947475.1	ComEA family DNA-binding protein	Machinery gene
C5B40_RS25545	-	5337911..5339908 (-)	1998	WP_024947474.1	polysaccharide biosynthesis protein	-

Sequence

Protein

• Length: 670 a.a.
• Molecular weight: 76067.31 Da
• Isoelectric Point: 5.0950

>NTDB_id=249362 C5B40_RS25525 WP_003104590.1 5333778..5335790(-) (uvrB) [Pseudomonas aeruginosa strain JB2]
MDTFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTLVLAPNKTLAAQLYGEFKTFF
PHNSVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINDHIEQMRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHL
DRGDRIDQRELLRRLTSLQYTRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDQIKAELKERLDYLRNNNKLVEAQRLEQRTRFDLEMILELGYCNGIENYSRYLSGRAPGEP
PPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKETLVEYGFRLPSALDNRPLRFEEWEAVSPQTIFVSATPGPYEA
EHAGRVIEQVVRPTGLVDPEIEVRPAMTQVDDLLSQIRQRVAKDERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRAGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLHGKAILYADNVTGSMQ
RAIDETERRRAKQIAFNEAHGIVPKGVRKDIKDILEGAVVPGARGKRKGVAKVAEESGRYENELRSPSEISKRIRQLEEK
MYQLARDLEFEAAAQLRDEIQTLRERLVNV

Nucleotide

• Length: 2013 bp

>NTDB_id=249362 C5B40_RS25525 WP_003104590.1 5333778..5335790(-) (uvrB) [Pseudomonas aeruginosa strain JB2]
ATGGATACGTTCCAACTCGACTCGCGCTTCAAGCCCGCCGGCGACCAGCCGGAAGCCATCCGGCAGATGGTCGAGGGGCT
GGAGGCGGGGCTTTCGCACCAGACCCTGCTGGGGGTGACGGGCTCTGGCAAGACTTTCAGCATCGCCAACGTGATTGCCC
AGGTGCAGCGCCCGACCCTGGTCCTGGCGCCGAACAAGACCCTGGCGGCCCAGCTCTACGGGGAGTTCAAGACGTTCTTC
CCGCACAATTCCGTGGAGTACTTCGTTTCCTACTACGACTACTACCAGCCGGAGGCCTACGTACCGTCTTCCGATACCTA
TATCGAGAAGGACTCCTCGATCAACGACCATATCGAGCAGATGCGCCTGTCGGCGACCAAGGCGCTGCTCGAGCGTCCGG
ATGCGATCATCGTCGCCACCGTGTCGTCCATCTACGGCCTCGGTGATCCCGCGTCCTACCTGAAGATGGTCCTGCACCTG
GACCGCGGCGACCGCATCGACCAGCGCGAACTGCTGCGGCGACTGACCAGCCTGCAGTACACCCGCAACGACATGGATTT
CGCCCGTGCGACTTTCCGTGTGCGTGGCGATGTGATCGACATCTTCCCGGCCGAATCCGATCTCGAGGCGATTCGTGTCG
AGTTGTTCGACGACGAGGTGGAAAGTCTCTCGGCCTTCGACCCGCTTACCGGCGAGGTGATCCGCAAGCTGCCGCGCTTC
ACCTTCTACCCCAAGAGCCACTACGTGACCCCGCGCGAGACGTTGCTGGAGGCGGTCGACCAGATCAAGGCCGAACTCAA
GGAACGCCTGGACTACCTGCGCAACAACAACAAGCTGGTGGAAGCCCAGCGCCTGGAGCAGCGCACGCGTTTCGACCTGG
AGATGATCCTCGAACTGGGCTACTGCAACGGCATCGAGAACTACTCGCGCTATCTTTCCGGGCGGGCCCCCGGCGAGCCG
CCGCCGACGCTCTACGACTACCTGCCGGCCAACTCGCTGCTGGTTATCGACGAATCGCACGTCAGCGTTCCGCAGGTCGG
CGCGATGTTCAAGGGCGACCGCTCGCGCAAGGAGACCCTGGTGGAATACGGTTTCCGCCTGCCTTCGGCGCTGGACAACC
GGCCGCTGCGCTTCGAAGAGTGGGAGGCGGTGAGTCCGCAGACCATCTTCGTCTCCGCCACCCCGGGCCCCTACGAGGCG
GAACATGCCGGGCGGGTCATCGAGCAGGTGGTGCGTCCCACCGGGCTGGTCGATCCGGAGATCGAGGTACGCCCGGCGAT
GACCCAGGTGGACGACCTGCTCTCGCAGATCCGCCAGCGGGTGGCCAAGGACGAGCGGGTGCTGGTGACTACCCTGACCA
AGCGCATGGCCGAGGACCTCACCGATTATCTCGGCGATCACGACGTGCGGGTGCGCTACCTGCACTCGGACATCGATACC
GTCGAGCGAGTGGAGATCATCCGCGACCTGCGCGCCGGTGCGTTCGACGTGCTGGTGGGGATCAACCTGCTGCGCGAAGG
CCTGGACATGCCCGAGGTGTCGCTGGTGGCGATCCTCGACGCGGACAAGGAAGGCTTCCTGCGCTCGGAGCGCTCGCTGA
TCCAGACCATCGGTCGTGCCGCGCGCAACCTGCACGGCAAGGCGATCCTCTACGCCGACAACGTCACCGGCTCGATGCAG
CGCGCGATCGACGAGACCGAGCGGCGTCGGGCCAAGCAGATCGCTTTCAACGAAGCCCATGGCATCGTGCCCAAGGGGGT
GCGCAAGGACATCAAGGACATTCTCGAAGGCGCCGTGGTGCCCGGCGCGCGCGGCAAGCGCAAGGGCGTGGCCAAGGTGG
CGGAGGAGAGCGGGCGCTACGAGAACGAACTGCGCTCGCCGAGCGAGATCAGCAAGCGCATCCGCCAACTGGAGGAAAAG
ATGTACCAGTTGGCCCGCGACCTGGAGTTCGAGGCGGCGGCGCAACTGCGCGACGAGATCCAGACGCTGCGCGAGCGCCT
GGTCAACGTCTGA

Domains

Predicted by InterProScan.

• UvrB/uvrC motif (UVR) (632-665)

• UvrB interaction domain (UvrB_inter) (158-248)

• Ultra-violet resistance protein B (UvrB) (550-592)

• Helicase conserved C-terminal domain (Helicase_C) (435-542)

• Type III restriction enzyme, res subunit (ResIII) (11-118)

3D structure

• AlphaFold DB: P72174

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	57.839	98.06	0.567
uvrB	Streptococcus pneumoniae R6	57.839	98.06	0.567
uvrB	Streptococcus pneumoniae D39	57.839	98.06	0.567