Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   CP942_RS16675 Genome accession   NZ_CP023666
Coordinates   3376658..3378970 (+) Length   770 a.a.
NCBI ID   WP_105979884.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain Bac48     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3371658..3383970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP942_RS16645 - 3373159..3374379 (+) 1221 WP_020452793.1 EAL and HDOD domain-containing protein -
  CP942_RS16650 - 3374422..3374769 (-) 348 WP_224146417.1 SDR family oxidoreductase -
  CP942_RS16660 degQ 3375255..3375395 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CP942_RS16665 - 3375583..3376485 (+) 903 WP_105979882.1 polyprenyl synthetase family protein -
  CP942_RS16670 comX 3376469..3376642 (+) 174 WP_043927976.1 competence pheromone ComX -
  CP942_RS16675 comP 3376658..3378970 (+) 2313 WP_105979884.1 ATP-binding protein Regulator
  CP942_RS16680 comA 3379057..3379695 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  CP942_RS16685 - 3379712..3380101 (+) 390 WP_009329508.1 hotdog fold thioesterase -
  CP942_RS16690 mnhG 3380138..3380512 (-) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  CP942_RS16695 - 3380496..3380780 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  CP942_RS16700 - 3380780..3381256 (-) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  CP942_RS16705 - 3381262..3382740 (-) 1479 WP_105979886.1 Na+/H+ antiporter subunit D -
  CP942_RS16710 - 3382733..3383074 (-) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  CP942_RS16715 - 3383074..3383505 (-) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 770 a.a.        Molecular weight: 89121.76 Da        Isoelectric Point: 6.5105

>NTDB_id=249124 CP942_RS16675 WP_105979884.1 3376658..3378970(+) (comP) [Bacillus paralicheniformis strain Bac48]
MKFSLKFVTGLLILTSFIYSIYVSYLFFNNLFVGTELKYNSKQQLEVIEVTMDSPADYSGLKKGDIIYRINDEKITEKNR
PDEDEALFHVYSLTILRDNEYIDIMTKDYFISYDILFVYLIPMIFYLLCLLCIYMILKANKSKKVMSSFLLIVFLLDISI
AYMSAGGVLRGDVLSRYINLLTFISVPVCYLHFIHEYFKETGKRFFNNKVFILYLLPIINIVIELFSDHLDLIRDSLAMI
NLFSFMIGIVITIAVIIRSLIKHKYSEQAYFLKMLMLTNYLAILPFLTLYVLPTFIIGDYIYSAPLVAPCLLLIPFSLVY
QFISNKIYDVEFLVGRLKYYGLLALIPTIVVVCTIILMKYQAGDYYTARLAIYIYLVMLGVFYLKEILDYRFRLKRFSEK
YNYQDSIFKFTQTIRTHSSLNQVLLELKQTILDVLIVSQAHVLKVKSDGTISLLEGDTEEYPWIPYEQEVTKVITDIGKI
VEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEGPNPAWLNKL
MFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLYD
LGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYEDD
GIGFDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=249124 CP942_RS16675 WP_105979884.1 3376658..3378970(+) (comP) [Bacillus paralicheniformis strain Bac48]
ATGAAATTCTCATTGAAATTTGTAACTGGTCTACTTATACTAACGAGTTTCATTTATAGCATCTATGTCTCCTATCTATT
TTTTAATAATTTGTTTGTTGGCACTGAATTAAAATATAATTCTAAACAACAATTAGAAGTTATAGAGGTAACAATGGATT
CGCCTGCTGATTATTCGGGTTTAAAAAAAGGTGATATCATTTATCGAATAAATGATGAAAAAATAACTGAAAAAAATAGA
CCTGATGAAGATGAGGCGCTTTTTCATGTTTATTCATTAACAATTTTAAGAGACAATGAATATATAGATATCATGACAAA
AGATTATTTTATCAGCTATGATATCTTATTTGTTTACTTAATACCAATGATTTTTTATTTGCTGTGCTTGTTATGTATTT
ATATGATTTTAAAAGCAAACAAATCAAAAAAAGTGATGTCGTCATTTTTATTAATCGTTTTTTTATTGGACATTTCAATA
GCTTACATGAGTGCTGGTGGAGTATTAAGAGGTGATGTATTAAGTAGATACATTAATTTGCTGACTTTTATTTCAGTTCC
GGTATGCTATCTACATTTTATACATGAATATTTTAAAGAGACAGGAAAGAGATTTTTTAATAATAAAGTTTTTATATTAT
ATTTATTACCGATAATAAATATAGTTATAGAACTCTTCAGCGACCATCTGGACCTTATAAGAGATTCGCTAGCAATGATT
AATCTTTTTTCTTTTATGATTGGTATAGTAATCACAATAGCAGTCATTATCAGGAGTTTAATTAAACATAAATACTCTGA
ACAAGCATACTTTTTAAAGATGCTTATGCTGACGAATTATCTAGCGATCTTGCCATTTCTCACTTTATATGTTTTACCAA
CATTTATAATAGGTGATTATATTTATTCTGCACCATTGGTCGCTCCTTGTCTCTTGTTAATACCTTTTTCTTTAGTTTAT
CAGTTTATATCAAATAAAATTTATGATGTTGAATTTTTAGTTGGTAGGTTAAAGTATTATGGTTTATTAGCTTTAATTCC
AACGATTGTTGTTGTTTGTACAATAATCTTAATGAAGTACCAGGCTGGGGATTATTATACAGCAAGGCTTGCAATCTATA
TCTACCTCGTCATGCTCGGGGTTTTTTACTTAAAAGAAATACTTGACTATCGCTTCCGTCTGAAACGTTTTTCAGAAAAG
TATAACTACCAAGACAGTATATTTAAGTTTACACAAACGATTCGAACACACTCATCTTTAAATCAGGTTTTGTTGGAATT
GAAACAAACAATTCTCGATGTTTTGATTGTCAGCCAAGCCCATGTTCTGAAAGTTAAAAGCGACGGGACAATATCTTTGC
TCGAGGGAGATACCGAAGAATATCCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGCAAAATC
GTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTTGTCGGTTTT
AAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCCTGGAAAACG
TCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAATTG
ATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACATGATTTCCTT
GAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAAGGCTCATCA
ATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTGTTGTACGAT
CTCGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAATAC
GGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATGCGG
TTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGATGAC
GGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGTATTCGCGAGCGAGTCCGCGC
GCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(681-768)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.351

100

0.538

Multiple sequence alignment