Detailed information NTG0249065

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CP943_RS19525
• Genome accession: NZ_CP023665
• Coordinates: 3806152..3807309 (-)
• Length: 385 a.a.
• NCBI ID: WP_020453119.1
• Uniprot ID: A0A6I7TVP7
• Organism: Bacillus paralicheniformis strain Bac84
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3801152..3812309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CP943_RS19495	-	3801390..3801809 (-)	420	WP_020453114.1	TIGR03826 family flagellar region protein	-
CP943_RS19500	comFC	3801868..3802605 (-)	738	WP_026580174.1	ComF family protein	Machinery gene
CP943_RS19505	-	3802562..3802846 (-)	285	WP_020453116.1	late competence development ComFB family protein	-
CP943_RS19510	comFA	3802901..3804295 (-)	1395	WP_026580175.1	DEAD/DEAH box helicase	Machinery gene
CP943_RS19515	-	3804419..3805261 (-)	843	WP_020453118.1	DegV family protein	-
CP943_RS19520	degU	3805381..3806070 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
CP943_RS19525	degS	3806152..3807309 (-)	1158	WP_020453119.1	histidine kinase	Regulator
CP943_RS19530	-	3807532..3808170 (+)	639	WP_095292066.1	YigZ family protein	-
CP943_RS19535	-	3808185..3809264 (+)	1080	WP_026580176.1	LCP family protein	-
CP943_RS19540	-	3809317..3809685 (-)	369	WP_105981256.1	hypothetical protein	-
CP943_RS19545	-	3809794..3810858 (-)	1065	WP_095292064.1	glycosyltransferase family 4 protein	-
CP943_RS19550	tuaH	3810989..3812176 (-)	1188	WP_026580178.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44650.34 Da
• Isoelectric Point: 6.7862

>NTDB_id=249065 CP943_RS19525 WP_020453119.1 3806152..3807309(-) (degS) [Bacillus paralicheniformis strain Bac84]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=249065 CP943_RS19525 WP_020453119.1 3806152..3807309(-) (degS) [Bacillus paralicheniformis strain Bac84]
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGATGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGAAACCGCTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTCGTCTTAAACTATTTAAATCAGGATCTGCGCCAGGTTGGCGTTCTCCTA
GAAGATGCGCAGGCCAAACAGGATTTCGGACTGCGGATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGCCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAGAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATCCATTTCCAATGCATCGGAGAATCCGAAGATAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TTTTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAGATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGTTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTTAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGTTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCGCTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A6I7TVP7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894