Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   CO686_RS07725 Genome accession   NZ_CP023507
Coordinates   1570144..1572105 (-) Length   653 a.a.
NCBI ID   WP_096753699.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1565144..1577105
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS07705 (CO686_07705) - 1566377..1567069 (-) 693 WP_096753696.1 tyrosine-protein kinase -
  CO686_RS07710 (CO686_07710) cpsC 1567079..1567771 (-) 693 WP_000664125.1 capsular polysaccharide biosynthesis protein CpsC -
  CO686_RS07715 (CO686_07715) cps4B 1567780..1568511 (-) 732 WP_096753697.1 capsular polysaccharide biosynthesis protein Cps4B -
  CO686_RS07720 (CO686_07720) - 1568513..1569958 (-) 1446 WP_096753698.1 LCP family protein -
  CO686_RS07725 (CO686_07725) amiA3 1570144..1572105 (-) 1962 WP_096753699.1 peptide ABC transporter substrate-binding protein Regulator
  CO686_RS07730 (CO686_07730) amiA 1572252..1574219 (-) 1968 WP_053091098.1 peptide ABC transporter substrate-binding protein Regulator
  CO686_RS07735 (CO686_07735) - 1574389..1575999 (-) 1611 WP_049550234.1 alpha-glucosidase -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 73038.34 Da        Isoelectric Point: 4.8791

>NTDB_id=247873 CO686_RS07725 WP_096753699.1 1570144..1572105(-) (amiA3) [Streptococcus oralis strain FDAARGOS_367]
MIKLKKRLIGTGLVLATGILLSACGQSNTDTSTYSSTFSANPTTFNYLLDYYADNTAVITNLVDGLLENDSYGNLVPALA
EDWSVSSDGLTYTYKLRKDAKWYTADGEEYASVKAQDFVTGIKYAADNKGQAMDLIQNSIKGLNDYVTGVTNDFSTVGVK
ALDDYTVEYTLTRPEPYWNSKTTNSILFPVNEEFLKSKDKDFGTLTPDSILYNGPYLLKDFTSKSSIEYVKNPHYYDHDK
VTIEKVKLAYFDGSDQEMTIRNFESGAYSIAGVYPNSSNYAKTKEKYQDNIVYSLQDKTSWYFNFNVNRKTYNHTAKTTD
EQKKSAQTAILNKKFRQAINFGIDRTAYSAQSNGEEAASKTLRNTLVPPTFVQVGDKTFGEVTASKLVNYGTEWSGINLA
DAQDAYFNKEKAQAKFAEAKKELEAQGVTFPIHLDVPVDQTNKNAVSGMNSVKQTLETVLGSDNIVIDVQQLSTDDFGNV
AFLAPNPAARDYDLNFDGWVGDYQDPSTYLDPFNAETGFYLKIFGLDAKEDQELIKSLGLDTYTQLLKEADAENKDVAKR
YEKYAEAQAWMIDNSLVMSAMSNGGTASVTKVTPFTRAYSLVGIKGDGNNYKYMRLQKDPVTKKQFDEAKAKWEAESKRA
IEKSQKEFENHVK

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=247873 CO686_RS07725 WP_096753699.1 1570144..1572105(-) (amiA3) [Streptococcus oralis strain FDAARGOS_367]
ATGATCAAACTGAAAAAAAGACTAATCGGGACAGGTCTTGTCTTAGCGACAGGGATTTTGCTCTCTGCATGTGGACAGTC
CAACACAGATACTAGCACTTATTCATCAACATTTAGTGCGAATCCAACAACTTTTAACTATCTTCTAGATTATTATGCAG
ATAACACTGCCGTTATTACCAATCTCGTAGATGGATTGCTAGAAAATGACAGCTATGGGAACCTCGTACCTGCTCTTGCG
GAGGATTGGTCTGTTTCATCAGATGGTTTGACCTATACCTACAAGCTTAGAAAAGATGCCAAGTGGTATACGGCTGATGG
TGAGGAATACGCTTCAGTCAAAGCTCAGGATTTTGTCACTGGGATCAAATATGCTGCGGACAACAAGGGGCAAGCCATGG
ATCTGATTCAAAATTCAATCAAGGGATTGAATGACTATGTGACGGGTGTGACCAATGACTTTTCAACTGTTGGTGTCAAA
GCCTTGGATGACTATACGGTTGAGTACACTTTGACACGACCAGAACCTTATTGGAACTCTAAGACAACCAATAGTATTCT
TTTCCCAGTCAACGAAGAGTTTTTGAAATCAAAAGATAAAGACTTTGGTACCTTGACACCAGACAGCATCCTTTATAACG
GTCCATATCTGTTAAAAGATTTCACATCAAAATCTTCGATCGAATATGTGAAGAATCCACACTATTATGACCATGATAAA
GTAACCATTGAAAAAGTTAAGTTAGCCTACTTTGATGGGTCAGATCAGGAGATGACCATTCGAAACTTTGAAAGTGGTGC
TTACTCGATTGCAGGAGTCTATCCAAACAGTTCGAATTATGCTAAGACAAAAGAAAAATACCAAGACAATATCGTCTATA
GCTTACAAGACAAGACATCTTGGTACTTTAACTTTAACGTCAACCGCAAAACCTATAATCATACCGCTAAAACAACGGAC
GAACAAAAGAAATCAGCTCAAACAGCTATCTTAAATAAAAAATTCCGTCAGGCTATCAACTTTGGAATTGATCGAACAGC
CTACTCTGCTCAATCTAACGGTGAAGAAGCAGCGAGCAAAACCCTTCGTAATACTCTGGTTCCCCCAACATTTGTCCAGG
TGGGAGACAAGACCTTTGGAGAAGTAACAGCTTCTAAGCTTGTGAACTACGGAACTGAGTGGTCAGGCATCAATTTAGCA
GACGCTCAAGATGCTTACTTCAATAAGGAAAAGGCCCAAGCAAAATTTGCGGAAGCTAAAAAGGAATTAGAAGCCCAAGG
CGTGACTTTCCCAATCCATTTGGATGTCCCTGTTGATCAGACAAATAAAAATGCGGTTTCTGGTATGAACTCGGTTAAAC
AAACCCTTGAAACAGTACTAGGTTCTGACAATATCGTCATTGATGTTCAACAGCTTTCTACAGATGACTTTGGAAATGTT
GCCTTCCTAGCACCAAATCCAGCAGCTCGTGACTACGACCTAAACTTTGATGGTTGGGTTGGTGATTACCAGGATCCATC
AACTTATCTAGATCCCTTCAATGCTGAAACTGGCTTCTATCTCAAGATTTTTGGTCTTGATGCCAAGGAAGACCAAGAGC
TCATTAAGAGTTTGGGGCTCGATACCTATACACAACTCTTGAAAGAAGCAGATGCTGAGAACAAAGATGTCGCTAAGCGT
TATGAAAAATACGCTGAAGCGCAAGCTTGGATGATTGACAATTCTCTAGTCATGTCTGCTATGTCAAATGGTGGTACAGC
CTCTGTAACCAAAGTAACTCCGTTTACACGTGCCTACTCCCTAGTGGGAATCAAGGGTGACGGAAATAATTATAAGTACA
TGAGATTACAAAAAGACCCTGTTACCAAGAAACAATTTGATGAAGCCAAGGCTAAGTGGGAAGCAGAAAGTAAAAGAGCT
ATCGAAAAGAGCCAAAAAGAGTTTGAAAACCACGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(75-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

51.846

99.541

0.516
  amiA3 Streptococcus thermophilus LMG 18311

51.692

99.541

0.515
  amiA Streptococcus salivarius strain HSISS4

50.61

100

0.508

Multiple sequence alignment