Detailed information
Bioinformatically predicted
Overview
| Name | degS | Type | Regulator |
| Locus tag | COP00_RS13140 | Genome accession | NZ_CP023481 |
| Coordinates | 2430408..2431565 (-) | Length | 385 a.a. |
| NCBI ID | WP_048353648.1 | Uniprot ID | A0A0T6BKH2 |
| Organism | Bacillus glycinifermentans strain KBN06P03352 | ||
| Function | phosphorylation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2425408..2436565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COP00_RS13110 (COP00_13110) | - | 2425636..2426055 (-) | 420 | WP_096891936.1 | TIGR03826 family flagellar region protein | - |
| COP00_RS13115 (COP00_13115) | comFC | 2426113..2426847 (-) | 735 | WP_048353651.1 | amidophosphoribosyltransferase | Machinery gene |
| COP00_RS13120 (COP00_13120) | - | 2426804..2427088 (-) | 285 | WP_048353650.1 | late competence development ComFB family protein | - |
| COP00_RS13125 (COP00_13125) | comFA | 2427144..2428553 (-) | 1410 | WP_057957755.1 | DEAD/DEAH box helicase | Machinery gene |
| COP00_RS13130 (COP00_13130) | - | 2428672..2429514 (-) | 843 | WP_048353649.1 | DegV family protein | - |
| COP00_RS13135 (COP00_13135) | degU | 2429636..2430325 (-) | 690 | WP_046130088.1 | two-component system response regulator DegU | Regulator |
| COP00_RS13140 (COP00_13140) | degS | 2430408..2431565 (-) | 1158 | WP_048353648.1 | sensor histidine kinase | Regulator |
| COP00_RS13145 (COP00_13145) | - | 2431785..2432423 (+) | 639 | WP_048353647.1 | YigZ family protein | - |
| COP00_RS13150 (COP00_13150) | - | 2432438..2433529 (+) | 1092 | WP_048353646.1 | LCP family protein | - |
| COP00_RS13155 (COP00_13155) | - | 2433706..2434770 (-) | 1065 | WP_048353645.1 | glycosyltransferase family 4 protein | - |
| COP00_RS13160 (COP00_13160) | tuaH | 2434913..2436091 (-) | 1179 | WP_048353644.1 | teichuronic acid biosynthesis protein TuaH | - |
Sequence
Protein
Download Length: 385 a.a. Molecular weight: 44618.34 Da Isoelectric Point: 7.0402
>NTDB_id=247518 COP00_RS13140 WP_048353648.1 2430408..2431565(-) (degS) [Bacillus glycinifermentans strain KBN06P03352]
MSISKMDSKALDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDKLEVHARHARNRLSEVSR
NFHKFSETEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAQKKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL
MSISKMDSKALDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDKLEVHARHARNRLSEVSR
NFHKFSETEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAQKKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL
Nucleotide
Download Length: 1158 bp
>NTDB_id=247518 COP00_RS13140 WP_048353648.1 2430408..2431565(-) (degS) [Bacillus glycinifermentans strain KBN06P03352]
GTGAGCATTTCCAAAATGGACTCCAAAGCCTTGGATTCAATAATTATGAAGATGTTAAAAACCGTTGACGGGAGCAAGGA
TGAAGTATTTCAAATCGGCGAACAGTCCCGTCAGCAATATGAAGGCTTGGTGGAAGAGCTGAAGCAGATCAAGCAGCAGG
TCAACGAAGTCATCGATCTCGGAGACAAGTTGGAGGTGCATGCCCGGCATGCGAGGAACCGTCTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAACGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTTGAGCTGACGATGAT
TCAGCAGCGCGAAAAGCAGCTGAGAGAGAAGCGCGACGATCTGGAAAGGCGTCTCCTCGGTCTTCAGGAAATCATTGAGC
GTTCCGAAGGGCTTGTCAGCCAGATAACTGTCGTTTTAAACTATTTAAACCAAGATCTGCGCCAGGTCGGCGTTTTATTG
GAAGACGCGCAGGCAAAACAGGATTTCGGCTTGCGGATCATCGAAGCGCAAGAGGAAGAAAGAAAAAGGGTTTCGCGCGA
AATTCATGACGGTCCGGCGCAAATGCTGGCAAACGTGATGATGAGATCTGAATTGATCGAACGGATTTTCAGGGACAAGG
GGACCGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGCAATGCCCTTTATGAAGTCAGACGGATTATT
TATGACTTAAGGCCGATGGCTTTAGACGATTTGGGCCTGATTCCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGCAAAGCGAAAATCCATTTCCATTGCATCGGGGAATCGGAAGACAGGCGGATTGCACCTCGATTTGAAGTGGCGC
TTTTCCGGCTGGCTCAGGAAGCTGTCACAAATGCCCTAAAACATTCCGAATCAACCGAAATTCATGTTAAAGTAGAAGTG
ACGAAAGATTTTGTTACGCTGATTATAAAAGATAACGGAAACGGCTTTGATTTAAAAGAAGCGCAAAAGAAGAAAAACAA
ATCGTTCGGTCTGCTTGGAATGAAGGAAAGAGTCGATTTGCTTGAAGGTACGATGACGATCGACTCGAAAATAGGTCTCG
GGACATTTATTTTAATTAAAGTTCCGCTGTCATTGTAA
GTGAGCATTTCCAAAATGGACTCCAAAGCCTTGGATTCAATAATTATGAAGATGTTAAAAACCGTTGACGGGAGCAAGGA
TGAAGTATTTCAAATCGGCGAACAGTCCCGTCAGCAATATGAAGGCTTGGTGGAAGAGCTGAAGCAGATCAAGCAGCAGG
TCAACGAAGTCATCGATCTCGGAGACAAGTTGGAGGTGCATGCCCGGCATGCGAGGAACCGTCTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAACGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTTGAGCTGACGATGAT
TCAGCAGCGCGAAAAGCAGCTGAGAGAGAAGCGCGACGATCTGGAAAGGCGTCTCCTCGGTCTTCAGGAAATCATTGAGC
GTTCCGAAGGGCTTGTCAGCCAGATAACTGTCGTTTTAAACTATTTAAACCAAGATCTGCGCCAGGTCGGCGTTTTATTG
GAAGACGCGCAGGCAAAACAGGATTTCGGCTTGCGGATCATCGAAGCGCAAGAGGAAGAAAGAAAAAGGGTTTCGCGCGA
AATTCATGACGGTCCGGCGCAAATGCTGGCAAACGTGATGATGAGATCTGAATTGATCGAACGGATTTTCAGGGACAAGG
GGACCGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGCAATGCCCTTTATGAAGTCAGACGGATTATT
TATGACTTAAGGCCGATGGCTTTAGACGATTTGGGCCTGATTCCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGCAAAGCGAAAATCCATTTCCATTGCATCGGGGAATCGGAAGACAGGCGGATTGCACCTCGATTTGAAGTGGCGC
TTTTCCGGCTGGCTCAGGAAGCTGTCACAAATGCCCTAAAACATTCCGAATCAACCGAAATTCATGTTAAAGTAGAAGTG
ACGAAAGATTTTGTTACGCTGATTATAAAAGATAACGGAAACGGCTTTGATTTAAAAGAAGCGCAAAAGAAGAAAAACAA
ATCGTTCGGTCTGCTTGGAATGAAGGAAAGAGTCGATTTGCTTGAAGGTACGATGACGATCGACTCGAAAATAGGTCTCG
GGACATTTATTTTAATTAAAGTTCCGCTGTCATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degS | Bacillus subtilis subsp. subtilis str. 168 |
89.351 |
100 |
0.894 |