Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | CO204_RS01215 | Genome accession | NZ_CP023477 |
| Coordinates | 232477..233430 (+) | Length | 317 a.a. |
| NCBI ID | WP_002269808.1 | Uniprot ID | - |
| Organism | Streptococcus mutans strain LAR01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 227477..238430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO204_RS01175 (CO204_01175) | - | 228243..228626 (+) | 384 | WP_002269807.1 | DUF1033 family protein | - |
| CO204_RS01180 (CO204_01180) | comYA | 228756..229697 (+) | 942 | WP_002264247.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CO204_RS01185 (CO204_01185) | comYB | 229633..230664 (+) | 1032 | WP_255262721.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CO204_RS01190 (CO204_01190) | comYC | 230664..230978 (+) | 315 | WP_002263437.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CO204_RS01195 (CO204_01195) | comYD | 230965..231369 (+) | 405 | WP_002263438.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CO204_RS01200 (CO204_01200) | comYE | 231341..231634 (+) | 294 | WP_002263439.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| CO204_RS01205 (CO204_01205) | comYF | 231621..232055 (+) | 435 | WP_002263440.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CO204_RS01210 (CO204_01210) | comYG | 232033..232422 (+) | 390 | WP_002263441.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| CO204_RS01215 (CO204_01215) | comYH | 232477..233430 (+) | 954 | WP_002269808.1 | class I SAM-dependent methyltransferase | Machinery gene |
| CO204_RS01220 (CO204_01220) | - | 233489..234688 (+) | 1200 | WP_002263443.1 | acetate kinase | - |
| CO204_RS01225 (CO204_01225) | tnpA | 234901..235364 (+) | 464 | Protein_206 | IS200/IS605 family transposase | - |
| CO204_RS01235 (CO204_01235) | - | 235992..236237 (+) | 246 | WP_002263444.1 | helix-turn-helix transcriptional regulator | - |
| CO204_RS01240 (CO204_01240) | - | 236206..236646 (+) | 441 | WP_002264006.1 | hypothetical protein | - |
| CO204_RS01245 (CO204_01245) | - | 236699..237361 (+) | 663 | WP_002263446.1 | type II CAAX endopeptidase family protein | - |
| CO204_RS01250 (CO204_01250) | proC | 237446..238216 (-) | 771 | WP_002263447.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36286.59 Da Isoelectric Point: 5.2379
>NTDB_id=247401 CO204_RS01215 WP_002269808.1 232477..233430(+) (comYH) [Streptococcus mutans strain LAR01]
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNVCYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNVCYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
Nucleotide
Download Length: 954 bp
>NTDB_id=247401 CO204_RS01215 WP_002269808.1 232477..233430(+) (comYH) [Streptococcus mutans strain LAR01]
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGTTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGACGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGTTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGACGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
99.369 |
100 |
0.994 |
| comYH | Streptococcus mutans UA140 |
99.369 |
100 |
0.994 |