Detailed information NTG0246735

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CNR27_RS05520
• Genome accession: NZ_CP023406
• Coordinates: 1214799..1215857 (+)
• Length: 352 a.a.
• NCBI ID: WP_096297294.1
• Uniprot ID: -
• Organism: Luteimonas chenhongjianii strain 100111
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1209799..1220857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CNR27_RS05505 (CNR27_05505)	-	1210841..1211224 (+)	384	WP_123832776.1	hypothetical protein	-
CNR27_RS05510 (CNR27_05510)	-	1211265..1211906 (-)	642	WP_096297292.1	hypothetical protein	-
CNR27_RS05515 (CNR27_05515)	-	1212050..1214599 (-)	2550	WP_096297293.1	penicillin-binding protein 1A	-
CNR27_RS05520 (CNR27_05520)	pilM	1214799..1215857 (+)	1059	WP_096297294.1	pilus assembly protein PilM	Machinery gene
CNR27_RS05525 (CNR27_05525)	-	1215857..1216396 (+)	540	Protein_1084	PilN domain-containing protein	-
CNR27_RS05530 (CNR27_05530)	pilO	1216504..1217208 (+)	705	WP_096297296.1	type 4a pilus biogenesis protein PilO	-
CNR27_RS05535 (CNR27_05535)	-	1217208..1217750 (+)	543	WP_096297297.1	pilus assembly protein PilP	-
CNR27_RS05540 (CNR27_05540)	-	1217765..1219702 (+)	1938	WP_096297298.1	type IV pilus secretin PilQ family protein	-
CNR27_RS05545 (CNR27_05545)	-	1219844..1220839 (+)	996	WP_096297299.1	MoxR family ATPase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37618.11 Da
• Isoelectric Point: 4.3879

>NTDB_id=246735 CNR27_RS05520 WP_096297294.1 1214799..1215857(+) (pilM) [Luteimonas chenhongjianii strain 100111]
MGLITKSQVPVIGVDISSTAVKLLQLSRQGNRYRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAVSRSGTKAKHAAAA
VSGSAVITKTIPMPADLDEDDMESQVELEAVNYIPYPIEEVNLDFEVLGAMPGNAEMVQVLLAASRSENVELRASALELG
GLTAKVIDVEAFAVENAFAMLAGTLSMPADGVVALVDVGATMTTLNVLRNGRSLYSREQVFGGKQLTDEVMRRYGLSYEE
AGLAKRQGGLPESYEVEVLEPFKEAMVQQVSRLLQFFYAGSDFNRVDQVVLAGGCASIPGVADMVEEQLGVQTVLANPLA
QMTLGPRVQAHALAQDAPALMIACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=246735 CNR27_RS05520 WP_096297294.1 1214799..1215857(+) (pilM) [Luteimonas chenhongjianii strain 100111]
GTGGGGCTCATCACAAAAAGCCAGGTGCCGGTCATCGGCGTCGACATCAGCTCGACTGCCGTCAAGCTGTTGCAGCTGTC
GCGGCAGGGCAATCGTTATCGCGTCGAGCATTACGCGGTCGAGCCTTTGCCGCCCAATGCGGTGGTCGAGAAGAACATCG
TCGAGGTCGAAGCGGTGGGTGAGGCGATCCGGCGCGCGGTGTCGCGTTCGGGCACCAAGGCCAAGCATGCCGCAGCCGCG
GTGTCGGGTTCGGCAGTGATCACCAAGACGATCCCGATGCCGGCCGACCTCGACGAGGACGACATGGAATCGCAGGTCGA
GCTCGAGGCGGTCAACTACATTCCGTACCCGATCGAGGAAGTGAACCTCGACTTCGAAGTGCTCGGTGCGATGCCGGGCA
ATGCGGAGATGGTCCAGGTGCTGCTGGCCGCGTCACGATCGGAGAACGTCGAGCTGCGTGCCTCGGCGCTCGAGCTGGGT
GGCCTGACGGCCAAGGTCATCGATGTCGAGGCCTTCGCGGTCGAGAACGCCTTCGCGATGCTTGCAGGCACGCTCAGCAT
GCCGGCCGATGGCGTGGTTGCGCTGGTCGATGTCGGCGCGACGATGACCACGCTCAACGTGCTTCGGAACGGTCGCAGCC
TCTACTCGCGCGAGCAGGTGTTCGGCGGCAAGCAGCTCACCGACGAGGTGATGCGCCGCTACGGCCTCAGCTACGAGGAA
GCCGGCCTCGCCAAGCGTCAAGGGGGTCTGCCCGAGAGCTACGAAGTCGAAGTACTCGAGCCGTTCAAGGAGGCGATGGT
CCAGCAGGTGAGCCGTCTGCTGCAGTTCTTCTACGCCGGCAGCGACTTCAACCGGGTCGATCAGGTGGTCCTGGCCGGCG
GCTGCGCGTCCATTCCGGGCGTTGCAGACATGGTCGAGGAGCAACTGGGCGTGCAGACCGTGCTGGCCAATCCGCTCGCG
CAGATGACGCTCGGCCCGCGGGTGCAGGCGCATGCGCTCGCCCAGGACGCGCCGGCACTGATGATCGCCTGCGGCCTGGC
CCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.989	100	0.52
comM	Acinetobacter nosocomialis M2	51.705	100	0.517
comM	Acinetobacter baylyi ADP1	51.17	97.159	0.497
pilM	Legionella pneumophila strain ERS1305867	44.507	100	0.449