Detailed information NTG0246733

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CNR27_RS05350
• Genome accession: NZ_CP023406
• Coordinates: 1176009..1177439 (-)
• Length: 476 a.a.
• NCBI ID: WP_096297264.1
• Uniprot ID: A0A290XD66
• Organism: Luteimonas chenhongjianii strain 100111
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1171009..1182439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CNR27_RS05335 (CNR27_05335)	pilB	1172385..1174109 (-)	1725	WP_096297261.1	type IV-A pilus assembly ATPase PilB	Machinery gene
CNR27_RS05340 (CNR27_05340)	-	1174439..1174906 (-)	468	WP_096297262.1	pilin	-
CNR27_RS05345 (CNR27_05345)	-	1175106..1175825 (-)	720	WP_096297263.1	hypothetical protein	-
CNR27_RS05350 (CNR27_05350)	pilR	1176009..1177439 (-)	1431	WP_096297264.1	sigma-54 dependent transcriptional regulator	Regulator
CNR27_RS05355 (CNR27_05355)	-	1177872..1179488 (-)	1617	WP_245815760.1	ATP-binding protein	-
CNR27_RS05360 (CNR27_05360)	sucC	1179661..1180821 (+)	1161	WP_096297266.1	ADP-forming succinate--CoA ligase subunit beta	-
CNR27_RS05365 (CNR27_05365)	sucD	1180967..1181839 (+)	873	WP_096297267.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 476 a.a.
• Molecular weight: 51702.24 Da
• Isoelectric Point: 7.0619

>NTDB_id=246733 CNR27_RS05350 WP_096297264.1 1176009..1177439(-) (pilR) [Luteimonas chenhongjianii strain 100111]
MSEHRSVLIVDDEQDIRELLVLTLGRMGLRTETAPTLSCARELLASGPFDLCLTDMRLPDGSGLDLIGEIATRYPGMPVA
MITAYGNVEAAVEALKAGAFDFVSKPVDIHVLRGLVRQALELGERAKRETEAHSSRLLGTSDAMVTLRNTITKVARSQAP
VFINGESGTGKELVARTIHAQGARASGPFIPVNCGAIPTELMESEFFGHRKGSFTGANSDKPGLFQAADGGTLFLDEVAE
LPLAMQVKLLRAIQEKCIRPVGAPAEVQVDVRILSATHKDLAQLVNDGRFRHDLYYRINVIGLHVPPLRERTGDLPLLSD
AILRRLAQAMHRAPPALTDDAVAALEAYRFPGNVRELENILERALAMADGDRITAADLHLPASRNLQQTAQPQRSSPFIT
GTHQALPAGPSPPRDPRTLSPYDTASSALPSFIEDIERAAIQQALQENRYNKTKTAAALGITFRALRYKLKKLGID

Nucleotide

• Length: 1431 bp

>NTDB_id=246733 CNR27_RS05350 WP_096297264.1 1176009..1177439(-) (pilR) [Luteimonas chenhongjianii strain 100111]
ATGAGTGAACATCGCAGCGTCCTGATCGTCGATGACGAGCAGGACATCCGTGAACTGCTGGTCCTTACCCTCGGTCGCAT
GGGTCTGCGTACCGAAACCGCACCGACGCTCTCATGCGCCCGTGAACTGCTGGCCTCGGGCCCCTTCGACCTGTGCCTGA
CCGACATGCGCCTGCCCGATGGCTCGGGCCTGGACCTCATCGGCGAGATCGCGACGCGCTACCCCGGCATGCCGGTGGCG
ATGATCACCGCCTACGGGAATGTCGAGGCGGCGGTCGAGGCGCTTAAGGCCGGCGCATTCGACTTCGTCAGCAAGCCGGT
CGACATCCACGTGCTGCGCGGCCTGGTCCGCCAGGCGCTGGAGCTGGGCGAACGCGCCAAGCGTGAGACCGAGGCGCACA
GCAGTCGCCTGCTCGGCACGTCCGATGCCATGGTCACGTTGCGCAACACCATCACCAAGGTGGCCCGCAGCCAGGCGCCG
GTCTTCATCAATGGAGAATCGGGCACCGGCAAGGAACTGGTCGCCCGCACCATCCACGCCCAGGGCGCCCGCGCCAGCGG
CCCCTTCATCCCGGTCAACTGCGGCGCGATCCCGACCGAGCTGATGGAGAGCGAGTTCTTCGGCCACCGCAAGGGCAGCT
TCACCGGCGCGAACAGCGACAAGCCCGGCCTGTTCCAGGCCGCCGATGGTGGCACGCTGTTCCTCGACGAGGTGGCCGAG
CTGCCGCTGGCCATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAGAAGTGCATCCGCCCGGTCGGCGCGCCGGCCGAGGT
ACAGGTGGACGTGCGCATCCTCTCGGCCACGCACAAGGATCTGGCGCAGCTGGTCAACGACGGCCGCTTCCGCCACGATC
TTTACTACCGCATCAACGTGATCGGCCTGCACGTGCCGCCGCTGCGCGAGCGCACCGGCGACCTGCCGCTGCTCTCGGAC
GCCATCCTGCGCCGACTGGCCCAGGCCATGCACCGCGCGCCGCCCGCCCTGACCGACGACGCCGTCGCCGCGCTGGAGGC
CTACCGCTTCCCCGGCAACGTGCGCGAACTGGAGAACATTCTCGAACGCGCCCTGGCCATGGCCGACGGCGATCGCATCA
CCGCCGCGGACCTGCACCTGCCCGCGTCGAGAAACCTCCAGCAGACCGCCCAGCCGCAGCGGAGCTCCCCCTTCATCACC
GGCACCCACCAGGCCCTGCCGGCCGGCCCCTCCCCACCGCGCGACCCGCGCACGCTCAGCCCCTACGACACCGCCAGCTC
GGCGCTGCCGTCCTTCATCGAGGACATCGAGCGCGCCGCGATCCAGCAGGCGCTGCAGGAAAACCGCTACAACAAGACCA
AGACCGCAGCGGCGCTGGGGATCACCTTTCGGGCGCTGCGCTACAAGCTGAAAAAGCTGGGGATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (433-473)

• Sigma-54 interaction domain (Sigma54_activat) (138-303)

• Response regulator receiver domain (Response_reg) (7-114)

3D structure

• AlphaFold DB: A0A290XD66

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.792	100	0.603
pilR	Acinetobacter baumannii strain A118	48.203	99.37	0.479