Detailed information NTG0245764

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: CLJ08_RS04970
• Genome accession: NZ_CP023299
• Coordinates: 1009680..1011896 (-)
• Length: 738 a.a.
• NCBI ID: WP_096048371.1
• Uniprot ID: -
• Organism: Pseudomonas mosselii strain BS011
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1004680..1016896

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLJ08_RS04935 (CLJ08_04935)	murB	1004997..1006016 (-)	1020	WP_062573280.1	UDP-N-acetylmuramate dehydrogenase	-
CLJ08_RS04940 (CLJ08_04940)	-	1006013..1006477 (-)	465	WP_062573279.1	low molecular weight protein-tyrosine-phosphatase	-
CLJ08_RS04945 (CLJ08_04945)	kdsB	1006477..1007241 (-)	765	WP_096048370.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CLJ08_RS04950 (CLJ08_04950)	-	1007238..1007423 (-)	186	WP_011532874.1	Trm112 family protein	-
CLJ08_RS04955 (CLJ08_04955)	lpxK	1007458..1008462 (-)	1005	WP_062573277.1	tetraacyldisaccharide 4'-kinase	-
CLJ08_RS04960 (CLJ08_04960)	-	1008462..1008896 (-)	435	WP_028690977.1	ExbD/TolR family protein	-
CLJ08_RS04965 (CLJ08_04965)	exbB	1008893..1009528 (-)	636	WP_084942595.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
CLJ08_RS04970 (CLJ08_04970)	comA	1009680..1011896 (-)	2217	WP_096048371.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CLJ08_RS04975 (CLJ08_04975)	-	1012041..1012682 (+)	642	WP_157763493.1	DUF2062 domain-containing protein	-
CLJ08_RS04980 (CLJ08_04980)	-	1012566..1013345 (-)	780	WP_028690974.1	ABC transporter permease	-
CLJ08_RS04985 (CLJ08_04985)	-	1013342..1014274 (-)	933	WP_062573273.1	ABC transporter ATP-binding protein	-
CLJ08_RS04990 (CLJ08_04990)	-	1014407..1015030 (-)	624	WP_096048372.1	glutathione S-transferase	-
CLJ08_RS04995 (CLJ08_04995)	-	1015561..1015800 (+)	240	WP_096048373.1	hypothetical protein	-
CLJ08_RS05000 (CLJ08_05000)	-	1015797..1016036 (+)	240	WP_028690971.1	DUF3077 domain-containing protein	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 79786.38 Da
• Isoelectric Point: 10.9399

>NTDB_id=245764 CLJ08_RS04970 WP_096048371.1 1009680..1011896(-) (comA) [Pseudomonas mosselii strain BS011]
MRTGMLALVLGLLSLRFLPALPPVGWLIPLLLLAVASLRTRAWPLGWLALGVCWACWSAQQALDDRLPAALDGRTLWLEG
RVVGLPTRTERGVRFELEQPQSRRARLPQRVQLSWFEGPPLRAGEHWRLAVNVRRPQGLLNPHGPDQEATLLARRVGATG
TVKAGTRQGEEASSWRDGLRQRLLATDAHGREAALAALVLGDGAGLAREDWQVLQATGTVHLLVISGQHIGLLAGLVYGL
VAGLARLGAWPRWLPWVPWACGLAMAAALAYGWLAGFGVPVQRACLMLAVVLFWRLRFRHLGAWVPLLMALSGVLLVEPL
ASLLPGFWLSFGAVAVLVLCFAARLGAWRPWQAWTRGQWVIAVGLLPVLLALGLPVSLSAPLANLLAVPWLSLGVLPLAL
LGTALLPVPGLGEVMLWLAGLSLDGLFAVLTRLAGLQPAWIPESLPLWAWLLVCLGAVLVLLPRGVPLRAPGAVMLLALW
APREQVPPGQVEVWQLDVGQGLAVLLRTRNHALLYDAGPAQGGRDLGETVVLPTLRKLGVKALDVMLISHGHADHAGGAA
AVRRGVPVARVLAGEVAGLEAASLCRSGERWQWDGVDFELWHWPQGASSNERSCVLRVQANGERLLLAGDMEAGAERAWL
AATDDPRVDWLQAPHHGSRTSSSEPFVQATAPRAVLISRGRHNGFGHPHGQVVERYRRHGVVVHDTAVEGALRLVLGSRG
GVEGVRRERRFWREVDEG

Nucleotide

• Length: 2217 bp

>NTDB_id=245764 CLJ08_RS04970 WP_096048371.1 1009680..1011896(-) (comA) [Pseudomonas mosselii strain BS011]
ATGCGCACAGGGATGCTGGCGCTGGTCCTCGGGCTGCTGAGCCTGCGTTTTCTACCTGCCCTGCCACCGGTCGGATGGCT
GATTCCATTGCTCTTGCTGGCCGTTGCCAGCCTGCGTACCCGGGCCTGGCCGTTGGGTTGGTTGGCGCTGGGTGTGTGCT
GGGCCTGCTGGTCGGCGCAGCAGGCCCTGGACGACCGCCTGCCTGCCGCGCTGGATGGCCGCACGCTGTGGCTGGAGGGG
CGGGTGGTCGGCCTGCCGACCCGTACCGAGCGCGGCGTGCGTTTCGAGCTGGAGCAGCCGCAGTCACGCCGGGCCCGGTT
GCCGCAGCGGGTGCAATTGAGCTGGTTCGAGGGGCCGCCGCTGCGAGCGGGGGAGCACTGGCGGCTGGCGGTCAACGTGC
GTCGGCCGCAGGGCCTGCTCAACCCCCATGGCCCGGATCAGGAGGCCACGCTGTTGGCGCGGCGGGTCGGTGCCACCGGC
ACGGTCAAGGCCGGTACGCGCCAGGGCGAGGAGGCCAGCAGTTGGCGCGACGGCCTGCGCCAGCGCCTGCTGGCCACCGA
TGCCCATGGCCGGGAGGCGGCGTTGGCCGCCCTGGTGCTCGGGGATGGCGCAGGCCTGGCGCGGGAGGACTGGCAGGTGC
TGCAGGCCACCGGCACGGTACACCTGCTGGTGATTTCCGGGCAGCACATCGGCTTGCTGGCCGGATTGGTCTACGGGCTG
GTGGCGGGGCTGGCGCGCCTGGGGGCCTGGCCCCGGTGGTTGCCGTGGGTGCCCTGGGCCTGTGGCCTGGCGATGGCGGC
GGCATTGGCCTACGGCTGGCTGGCGGGGTTCGGCGTGCCGGTGCAGCGGGCGTGCCTGATGCTGGCTGTGGTGCTGTTCT
GGCGCTTGCGCTTTCGCCATCTGGGCGCCTGGGTGCCGTTGCTGATGGCGCTGTCGGGCGTGCTGCTGGTCGAGCCGCTG
GCCAGCCTGTTGCCGGGGTTCTGGCTGTCGTTCGGTGCGGTGGCGGTGCTGGTGCTGTGTTTTGCCGCCCGGCTGGGCGC
CTGGCGGCCCTGGCAGGCCTGGACCCGCGGCCAGTGGGTGATCGCCGTGGGGTTGCTGCCGGTGCTGCTGGCCTTGGGGC
TGCCCGTCAGCCTCAGTGCGCCGCTGGCCAATCTGCTGGCCGTGCCATGGCTGAGCCTGGGTGTGCTGCCGCTGGCGTTG
CTGGGTACGGCCCTGTTGCCGGTGCCTGGGCTGGGGGAGGTGATGCTGTGGCTGGCGGGGCTGTCGTTGGATGGGCTGTT
TGCCGTGTTGACGCGATTGGCAGGGCTGCAGCCTGCCTGGATACCTGAGTCACTGCCCTTGTGGGCCTGGCTGCTGGTGT
GCCTGGGTGCCGTGCTGGTGTTGCTGCCCCGGGGCGTGCCGTTGCGGGCGCCGGGCGCGGTCATGCTGCTGGCGCTGTGG
GCACCACGCGAGCAGGTGCCTCCGGGGCAAGTGGAGGTCTGGCAGCTGGATGTGGGGCAGGGCCTGGCGGTGTTGCTGCG
CACCCGCAATCACGCCTTGCTGTATGACGCAGGTCCGGCCCAGGGTGGCAGGGACCTGGGCGAGACGGTAGTGCTGCCGA
CCTTGCGCAAGCTTGGTGTGAAGGCGCTGGATGTGATGCTGATCAGCCATGGCCATGCCGACCATGCCGGTGGGGCGGCG
GCGGTGCGGCGTGGGGTGCCGGTGGCGCGGGTGCTGGCCGGCGAGGTTGCCGGGCTGGAAGCGGCCTCGCTGTGCCGCAG
TGGCGAGCGCTGGCAGTGGGATGGCGTCGATTTCGAGCTCTGGCACTGGCCGCAGGGGGCTTCCAGCAACGAGCGTTCCT
GTGTGTTGCGGGTGCAGGCCAATGGCGAGCGCTTGCTGCTGGCCGGGGACATGGAGGCCGGCGCGGAGCGTGCGTGGCTG
GCTGCGACCGACGATCCTCGGGTGGACTGGTTGCAGGCGCCGCACCATGGCAGCCGCACGTCGTCCAGCGAGCCGTTCGT
CCAGGCCACGGCACCGCGCGCGGTGCTGATTTCCCGGGGGCGGCACAATGGTTTCGGGCATCCCCATGGGCAGGTGGTCG
AGCGCTATCGCCGGCACGGGGTGGTGGTGCATGACACGGCGGTGGAGGGGGCGTTGCGGTTGGTGCTGGGGAGTCGGGGT
GGGGTGGAAGGTGTGCGCAGGGAGCGGCGGTTCTGGCGTGAGGTTGACGAGGGCTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (21-166)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-672)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.971	97.425	0.575
comA	Ralstonia pseudosolanacearum GMI1000	36.009	100	0.413