Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | CKG20_RS02120 | Genome accession | NZ_CP023047 |
| Coordinates | 416725..417063 (-) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain USDA-ARS-USMARC-186 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 411725..422063
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKG20_RS02105 (CKG20_02105) | - | 411727..413196 (-) | 1470 | WP_006250002.1 | HsdM family class I SAM-dependent methyltransferase | - |
| CKG20_RS02110 (CKG20_02110) | hsdR | 413244..415595 (-) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| CKG20_RS02115 (CKG20_02115) | asd | 415667..416560 (-) | 894 | WP_006250004.1 | archaetidylserine decarboxylase | - |
| CKG20_RS02120 (CKG20_02120) | comEA/comE1 | 416725..417063 (-) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| CKG20_RS02125 (CKG20_02125) | - | 417356..418675 (+) | 1320 | WP_006253337.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| CKG20_RS02130 (CKG20_02130) | - | 418739..419155 (+) | 417 | WP_006250330.1 | MliC family protein | - |
| CKG20_RS02135 (CKG20_02135) | waaF | 419266..420303 (+) | 1038 | WP_006250331.1 | lipopolysaccharide heptosyltransferase II | - |
| CKG20_RS02140 (CKG20_02140) | rfaC | 420370..421329 (+) | 960 | WP_061888435.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| CKG20_RS02145 (CKG20_02145) | rpsL | 421450..421824 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=244469 CKG20_RS02120 WP_006251644.1 416725..417063(-) (comEA/comE1) [Mannheimia haemolytica strain USDA-ARS-USMARC-186]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=244469 CKG20_RS02120 WP_006251644.1 416725..417063(-) (comEA/comE1) [Mannheimia haemolytica strain USDA-ARS-USMARC-186]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |