Detailed information NTG0244340

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: Aba7847_RS17770
• Genome accession: NZ_CP023031
• Coordinates: 3682406..3683524 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain 7847
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3677406..3688524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba7847_RS17760 (Aba7847_17735)	-	3680522..3681214 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
Aba7847_RS17765 (Aba7847_17740)	pilT	3681341..3682378 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
Aba7847_RS17770 (Aba7847_17745)	pilU	3682406..3683524 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
Aba7847_RS17775 (Aba7847_17750)	fur	3683594..3684031 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
Aba7847_RS17780 (Aba7847_17755)	-	3684143..3684541 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
Aba7847_RS17785 (Aba7847_17760)	-	3684596..3684919 (-)	324	WP_000442587.1	RnfH family protein	-
Aba7847_RS17790 (Aba7847_17765)	-	3684919..3685986 (-)	1068	WP_002019572.1	hypothetical protein	-
Aba7847_RS17800 (Aba7847_17775)	-	3686139..3686594 (-)	456	WP_000782976.1	bacteriohemerythrin	-
Aba7847_RS17805 (Aba7847_17780)	-	3686847..3687695 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=244340 Aba7847_RS17770 WP_000347039.1 3682406..3683524(+) (pilU) [Acinetobacter baumannii strain 7847]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=244340 Aba7847_RS17770 WP_000347039.1 3682406..3683524(+) (pilU) [Acinetobacter baumannii strain 7847]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395