Detailed information NTG0244158

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Aba10324_RS01370
• Genome accession: NZ_CP023022
• Coordinates: 282991..283692 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594588.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 10324
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 277991..288692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba10324_RS01335 (Aba10324_01340)	kdsB	278514..279275 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Aba10324_RS01340 (Aba10324_01345)	-	279287..280267 (+)	981	WP_001075419.1	DNA polymerase III subunit delta'	-
Aba10324_RS01345 (Aba10324_01350)	-	280279..280620 (+)	342	WP_049581987.1	PilZ domain-containing protein	-
Aba10324_RS01350 (Aba10324_01355)	-	280638..281411 (+)	774	WP_000497301.1	TatD family hydrolase	-
Aba10324_RS01355 (Aba10324_01360)	-	281449..282057 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Aba10324_RS01360 (Aba10324_01365)	-	282067..282621 (+)	555	WP_000841372.1	type II secretion system protein	-
Aba10324_RS01365 (Aba10324_01370)	xcpV	282611..282991 (+)	381	WP_000836909.1	type II secretion system minor pseudopilin GspI	Machinery gene
Aba10324_RS01370 (Aba10324_01375)	xcpW	282991..283692 (+)	702	WP_000594588.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Aba10324_RS01375 (Aba10324_01380)	gspK	283692..284651 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
Aba10324_RS01380 (Aba10324_01385)	-	284881..285477 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
Aba10324_RS01385 (Aba10324_01390)	ung	285528..286241 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
Aba10324_RS01390 (Aba10324_01395)	-	286238..287362 (+)	1125	WP_118877968.1	enoyl-CoA hydratase/isomerase family protein	-
Aba10324_RS01395 (Aba10324_01400)	tadA	287369..287872 (+)	504	WP_118877970.1	tRNA adenosine(34) deaminase TadA	-
Aba10324_RS01400 (Aba10324_01405)	-	287942..288385 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.55 Da
• Isoelectric Point: 9.3468

>NTDB_id=244158 Aba10324_RS01370 WP_000594588.1 282991..283692(+) (xcpW) [Acinetobacter baumannii strain 10324]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=244158 Aba10324_RS01370 WP_000594588.1 282991..283692(+) (xcpW) [Acinetobacter baumannii strain 10324]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATACCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991