Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CKA81_RS14800 | Genome accession | NZ_CP022987 |
| Coordinates | 3046626..3047123 (+) | Length | 165 a.a. |
| NCBI ID | WP_128355977.1 | Uniprot ID | A0A410GFF7 |
| Organism | Pollutimonas thiosulfatoxidans strain YE3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3041626..3052123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKA81_RS14790 (CKA81_14810) | uvrA | 3042359..3045205 (-) | 2847 | WP_128355975.1 | excinuclease ABC subunit UvrA | - |
| CKA81_RS14795 (CKA81_14815) | - | 3045336..3046523 (+) | 1188 | WP_128355976.1 | MFS transporter | - |
| CKA81_RS14800 (CKA81_14820) | ssb | 3046626..3047123 (+) | 498 | WP_128355977.1 | single-stranded DNA-binding protein | Machinery gene |
| CKA81_RS14805 (CKA81_14825) | - | 3047234..3047509 (-) | 276 | WP_128355978.1 | hypothetical protein | - |
| CKA81_RS14810 (CKA81_14830) | - | 3047650..3048687 (-) | 1038 | WP_128355979.1 | TRAP transporter substrate-binding protein | - |
| CKA81_RS14815 (CKA81_14835) | - | 3048711..3049991 (-) | 1281 | WP_128355980.1 | TRAP transporter large permease subunit | - |
| CKA81_RS14820 (CKA81_14840) | - | 3050016..3050570 (-) | 555 | WP_228255733.1 | TRAP transporter small permease | - |
| CKA81_RS14825 (CKA81_14845) | - | 3050595..3051452 (-) | 858 | WP_128355981.1 | fumarylacetoacetate hydrolase family protein | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 17900.82 Da Isoelectric Point: 5.9478
>NTDB_id=243882 CKA81_RS14800 WP_128355977.1 3046626..3047123(+) (ssb) [Pollutimonas thiosulfatoxidans strain YE3]
MASVNKVILIGNLGRDPEVRYSPDGAAICNISIATTSQWKDKTTGEKREETEWHRVVFYNRLAEIAGEYLKKGRAVYVEG
RLKTRKWQDKDTGADRYSTDIVADQMQMLGGRDGDSGGGGGGGDYNQAPAGQQQQRAQRPAQGRPAAPAASPAANLADMD
DDIPF
MASVNKVILIGNLGRDPEVRYSPDGAAICNISIATTSQWKDKTTGEKREETEWHRVVFYNRLAEIAGEYLKKGRAVYVEG
RLKTRKWQDKDTGADRYSTDIVADQMQMLGGRDGDSGGGGGGGDYNQAPAGQQQQRAQRPAQGRPAAPAASPAANLADMD
DDIPF
Nucleotide
Download Length: 498 bp
>NTDB_id=243882 CKA81_RS14800 WP_128355977.1 3046626..3047123(+) (ssb) [Pollutimonas thiosulfatoxidans strain YE3]
ATGGCCTCAGTAAACAAAGTCATTCTCATCGGCAACCTCGGGCGAGATCCCGAAGTGCGCTACAGCCCCGACGGTGCCGC
CATCTGCAACATTTCCATCGCCACCACGTCGCAATGGAAAGACAAGACCACGGGCGAAAAACGCGAAGAAACCGAATGGC
ACCGCGTGGTGTTCTATAACCGCCTGGCCGAAATCGCCGGCGAATACCTCAAGAAAGGCCGTGCCGTCTATGTGGAAGGC
CGTCTAAAGACGCGCAAATGGCAAGACAAAGACACCGGCGCTGATCGCTACAGCACCGATATCGTGGCCGACCAAATGCA
GATGCTGGGTGGTCGCGACGGCGACTCGGGCGGCGGTGGTGGTGGCGGTGACTACAACCAGGCTCCCGCCGGGCAGCAGC
AACAACGTGCGCAGCGCCCTGCGCAGGGTCGTCCTGCCGCGCCTGCGGCATCGCCGGCAGCCAATCTGGCTGATATGGAC
GACGATATCCCCTTCTAA
ATGGCCTCAGTAAACAAAGTCATTCTCATCGGCAACCTCGGGCGAGATCCCGAAGTGCGCTACAGCCCCGACGGTGCCGC
CATCTGCAACATTTCCATCGCCACCACGTCGCAATGGAAAGACAAGACCACGGGCGAAAAACGCGAAGAAACCGAATGGC
ACCGCGTGGTGTTCTATAACCGCCTGGCCGAAATCGCCGGCGAATACCTCAAGAAAGGCCGTGCCGTCTATGTGGAAGGC
CGTCTAAAGACGCGCAAATGGCAAGACAAAGACACCGGCGCTGATCGCTACAGCACCGATATCGTGGCCGACCAAATGCA
GATGCTGGGTGGTCGCGACGGCGACTCGGGCGGCGGTGGTGGTGGCGGTGACTACAACCAGGCTCCCGCCGGGCAGCAGC
AACAACGTGCGCAGCGCCCTGCGCAGGGTCGTCCTGCCGCGCCTGCGGCATCGCCGGCAGCCAATCTGGCTGATATGGAC
GACGATATCCCCTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
52.151 |
100 |
0.588 |
| ssb | Vibrio cholerae strain A1552 |
54.494 |
100 |
0.588 |
| ssb | Neisseria meningitidis MC58 |
51.667 |
100 |
0.564 |
| ssb | Neisseria gonorrhoeae MS11 |
51.667 |
100 |
0.564 |