Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | STR_RS00365 | Genome accession | NC_006449 |
| Coordinates | 60882..61472 (+) | Length | 196 a.a. |
| NCBI ID | WP_002949053.1 | Uniprot ID | Q5M6H5 |
| Organism | Streptococcus thermophilus CNRZ1066 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 55882..66472
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STR_RS11615 | - | 57012..57467 (-) | 456 | Protein_42 | DUF3021 domain-containing protein | - |
| STR_RS00345 (str0052) | - | 57464..57855 (-) | 392 | Protein_43 | LytTR family DNA-binding domain-containing protein | - |
| STR_RS00350 (str0053) | - | 58079..58384 (+) | 306 | WP_002949050.1 | hypothetical protein | - |
| STR_RS00355 (str0054) | hexB | 58436..60379 (+) | 1944 | WP_011225282.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| STR_RS00360 (str0055) | - | 60509..60730 (+) | 222 | WP_041826940.1 | hypothetical protein | - |
| STR_RS00365 (str0056) | ruvA | 60882..61472 (+) | 591 | WP_002949053.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| STR_RS00370 | - | 61479..62034 (+) | 556 | Protein_48 | DNA-3-methyladenine glycosylase I | - |
| STR_RS00375 (str0059) | cinA | 62130..63401 (+) | 1272 | WP_011226745.1 | competence/damage-inducible protein A | Machinery gene |
| STR_RS00380 (str0060) | recA | 63437..64591 (+) | 1155 | WP_011226746.1 | recombinase RecA | Machinery gene |
| STR_RS00385 (str0061) | spx | 64768..65166 (+) | 399 | WP_002949058.1 | transcriptional regulator Spx | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21699.98 Da Isoelectric Point: 5.2834
>NTDB_id=24320 STR_RS00365 WP_002949053.1 60882..61472(+) (ruvA) [Streptococcus thermophilus CNRZ1066]
MYDYIKGTLVKITAKHIVIETNGLGYIVTVANPYSFSDQMNQTIQVYLHQVIRDDAHLLFGFHTEDEKEVFLKLISVSGI
GPTTALAIVAVDDNQGLVAAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFAELPAETTNTTANQTAGNQQLDEAMEALL
ALGYKSTELKKVKAFFEDTNETAEQYIKSALKMLMK
MYDYIKGTLVKITAKHIVIETNGLGYIVTVANPYSFSDQMNQTIQVYLHQVIRDDAHLLFGFHTEDEKEVFLKLISVSGI
GPTTALAIVAVDDNQGLVAAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFAELPAETTNTTANQTAGNQQLDEAMEALL
ALGYKSTELKKVKAFFEDTNETAEQYIKSALKMLMK
Nucleotide
Download Length: 591 bp
>NTDB_id=24320 STR_RS00365 WP_002949053.1 60882..61472(+) (ruvA) [Streptococcus thermophilus CNRZ1066]
ATGTATGATTATATCAAGGGCACCCTAGTAAAAATCACAGCCAAACACATTGTCATAGAAACAAATGGTCTAGGATATAT
TGTCACTGTGGCTAATCCCTACAGCTTTTCTGATCAAATGAATCAGACTATCCAAGTGTATCTTCATCAAGTTATTAGAG
ATGATGCCCACCTACTTTTTGGTTTTCATACTGAAGATGAGAAAGAAGTTTTTCTTAAGTTGATTTCTGTTTCTGGGATA
GGTCCGACGACTGCTCTAGCCATAGTGGCTGTGGATGATAATCAGGGACTTGTTGCTGCTATTGATAATAGTGACATCAA
ATACCTGATGAAATTTCCAAAGATTGGTAAAAAGACTGCTCAACAAATGGTTCTTGATCTGGCAGGAAAATTTGCAGAGT
TACCAGCAGAAACGACCAATACTACGGCAAATCAGACTGCAGGAAATCAACAGTTGGATGAAGCTATGGAAGCTTTGCTT
GCTCTTGGGTACAAATCCACAGAGCTTAAGAAAGTGAAAGCCTTCTTTGAGGATACCAATGAAACGGCAGAGCAATATAT
TAAGTCCGCTCTTAAAATGTTGATGAAGTGA
ATGTATGATTATATCAAGGGCACCCTAGTAAAAATCACAGCCAAACACATTGTCATAGAAACAAATGGTCTAGGATATAT
TGTCACTGTGGCTAATCCCTACAGCTTTTCTGATCAAATGAATCAGACTATCCAAGTGTATCTTCATCAAGTTATTAGAG
ATGATGCCCACCTACTTTTTGGTTTTCATACTGAAGATGAGAAAGAAGTTTTTCTTAAGTTGATTTCTGTTTCTGGGATA
GGTCCGACGACTGCTCTAGCCATAGTGGCTGTGGATGATAATCAGGGACTTGTTGCTGCTATTGATAATAGTGACATCAA
ATACCTGATGAAATTTCCAAAGATTGGTAAAAAGACTGCTCAACAAATGGTTCTTGATCTGGCAGGAAAATTTGCAGAGT
TACCAGCAGAAACGACCAATACTACGGCAAATCAGACTGCAGGAAATCAACAGTTGGATGAAGCTATGGAAGCTTTGCTT
GCTCTTGGGTACAAATCCACAGAGCTTAAGAAAGTGAAAGCCTTCTTTGAGGATACCAATGAAACGGCAGAGCAATATAT
TAAGTCCGCTCTTAAAATGTTGATGAAGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae TIGR4 |
66 |
100 |
0.673 |
| ruvA | Streptococcus pneumoniae R6 |
66 |
100 |
0.673 |
| ruvA | Streptococcus pneumoniae D39 |
66 |
100 |
0.673 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
42.647 |
100 |
0.444 |