Detailed information NTG0242969

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: CGP95_RS01625
• Genome accession: NZ_CP022899
• Coordinates: 358620..359123 (+)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain 143
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 353620..364123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGP95_RS01590 (CGP95_00298)	-	354560..355405 (+)	846	WP_001573568.1	ParB/RepB/Spo0J family partition protein	-
CGP95_RS01595 (CGP95_00299)	-	355559..356440 (+)	882	WP_000373076.1	mechanosensitive ion channel family protein	-
CGP95_RS01600 (CGP95_00300)	-	356470..356673 (+)	204	WP_000157348.1	DUF951 domain-containing protein	-
CGP95_RS01605 (CGP95_00301)	ychF	356685..357782 (+)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
CGP95_RS01610 (CGP95_00302)	-	357868..358059 (-)	192	WP_001052483.1	hypothetical protein	-
CGP95_RS01620 (CGP95_00303)	rpsF	358303..358599 (+)	297	WP_001261460.1	30S ribosomal protein S6	-
CGP95_RS01625 (CGP95_00304)	ssbA	358620..359123 (+)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
CGP95_RS01630 (CGP95_00305)	rpsR	359175..359417 (+)	243	WP_000897044.1	30S ribosomal protein S18	-
CGP95_RS01635 (CGP95_00306)	-	359649..360368 (-)	720	WP_000400841.1	type II toxin-antitoxin system PemK/MazF family toxin	-
CGP95_RS01640 (CGP95_00307)	-	360481..361695 (-)	1215	WP_000270135.1	site-specific integrase	-
CGP95_RS01645 (CGP95_00308)	-	361856..362479 (-)	624	WP_000230361.1	helix-turn-helix transcriptional regulator	-
CGP95_RS01650 (CGP95_00309)	-	362628..362792 (+)	165	WP_001611932.1	helix-turn-helix domain-containing protein	-
CGP95_RS01655 (CGP95_00310)	-	362793..363065 (+)	273	WP_001138305.1	helix-turn-helix domain-containing protein	-
CGP95_RS01660 (CGP95_00311)	-	363077..363250 (+)	174	WP_000784892.1	hypothetical protein	-
CGP95_RS01665 (CGP95_00312)	-	363217..363420 (+)	204	WP_001231376.1	hypothetical protein	-
CGP95_RS01670 (CGP95_00313)	-	363422..363805 (+)	384	WP_000403837.1	hypothetical protein	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=242969 CGP95_RS01625 WP_000934799.1 358620..359123(+) (ssbA) [Staphylococcus aureus strain 143]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=242969 CGP95_RS01625 WP_000934799.1 358620..359123(+) (ssbA) [Staphylococcus aureus strain 143]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365