Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CGP91_RS01615 | Genome accession | NZ_CP022895 |
| Coordinates | 354934..355437 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain 85 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 355963..375038 | 354934..355437 | flank | 526 |
Gene organization within MGE regions
Location: 354934..375038
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP91_RS01615 (CGP91_00304) | ssbA | 354934..355437 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| CGP91_RS01620 (CGP91_00305) | rpsR | 355489..355731 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| CGP91_RS01625 (CGP91_00306) | - | 355963..356682 (-) | 720 | WP_000400841.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CGP91_RS01630 (CGP91_00307) | - | 356795..358009 (-) | 1215 | WP_000270135.1 | site-specific integrase | - |
| CGP91_RS01635 (CGP91_00308) | - | 358284..359003 (-) | 720 | WP_115300110.1 | helix-turn-helix transcriptional regulator | - |
| CGP91_RS01640 (CGP91_00309) | - | 359189..359401 (+) | 213 | WP_044292240.1 | helix-turn-helix transcriptional regulator | - |
| CGP91_RS01645 (CGP91_00310) | - | 359402..359674 (+) | 273 | WP_115300111.1 | helix-turn-helix domain-containing protein | - |
| CGP91_RS01650 (CGP91_00311) | - | 359686..359832 (+) | 147 | WP_000784893.1 | hypothetical protein | - |
| CGP91_RS01655 (CGP91_00312) | - | 359825..360037 (+) | 213 | WP_001058496.1 | hypothetical protein | - |
| CGP91_RS01660 (CGP91_00313) | - | 360039..360398 (+) | 360 | WP_001038252.1 | hypothetical protein | - |
| CGP91_RS01665 (CGP91_00314) | - | 360399..360719 (+) | 321 | WP_115300112.1 | DUF1474 family protein | - |
| CGP91_RS01670 (CGP91_00315) | - | 360783..361652 (+) | 870 | WP_115300113.1 | primase alpha helix C-terminal domain-containing protein | - |
| CGP91_RS01675 (CGP91_00316) | - | 361664..363034 (+) | 1371 | WP_115300114.1 | DNA primase family protein | - |
| CGP91_RS01680 (CGP91_00317) | - | 363310..363633 (+) | 324 | WP_236650833.1 | pathogenicity island protein | - |
| CGP91_RS01685 (CGP91_00318) | - | 363635..363898 (+) | 264 | WP_001003076.1 | hypothetical protein | - |
| CGP91_RS01690 (CGP91_00319) | - | 363900..364541 (+) | 642 | WP_115300115.1 | pathogenicity island protein | - |
| CGP91_RS01695 (CGP91_00320) | - | 365077..365418 (+) | 342 | WP_001190614.1 | hypothetical protein | - |
| CGP91_RS01700 (CGP91_00321) | - | 365449..366102 (+) | 654 | WP_000214170.1 | hypothetical protein | - |
| CGP91_RS01705 (CGP91_00322) | - | 366155..366682 (+) | 528 | WP_000771361.1 | spore coat protein | - |
| CGP91_RS01710 | - | 366814..367026 (+) | 213 | WP_001656917.1 | hypothetical protein | - |
| CGP91_RS01715 (CGP91_00324) | - | 367023..367592 (+) | 570 | WP_001293071.1 | terminase small subunit | - |
| CGP91_RS14500 | - | 367639..367722 (+) | 84 | Protein_328 | terminase small subunit | - |
| CGP91_RS01725 (CGP91_00325) | - | 367869..368837 (+) | 969 | WP_000801980.1 | Abi family protein | - |
| CGP91_RS01730 (CGP91_00326) | - | 368979..369416 (+) | 438 | WP_073392942.1 | DUF3102 domain-containing protein | - |
| CGP91_RS01735 (CGP91_00327) | - | 369534..370046 (+) | 513 | WP_000813311.1 | hypothetical protein | - |
| CGP91_RS14505 | - | 370062..370241 (+) | 180 | WP_000797954.1 | hypothetical protein | - |
| CGP91_RS01745 (CGP91_00328) | - | 371005..372012 (-) | 1008 | WP_001080636.1 | Abi family protein | - |
| CGP91_RS14405 | - | 372018..372675 (-) | 658 | Protein_334 | site-specific integrase | - |
| CGP91_RS01765 (CGP91_00329) | - | 372968..373336 (+) | 369 | WP_000849155.1 | YxeA family protein | - |
| CGP91_RS01770 (CGP91_00330) | - | 373517..374089 (+) | 573 | WP_000769723.1 | PepSY domain-containing protein | - |
| CGP91_RS01775 (CGP91_00331) | - | 374227..374490 (-) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
| CGP91_RS01780 (CGP91_00332) | - | 374784..375038 (+) | 255 | WP_000466746.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=242807 CGP91_RS01615 WP_000934799.1 354934..355437(+) (ssbA) [Staphylococcus aureus strain 85]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=242807 CGP91_RS01615 WP_000934799.1 354934..355437(+) (ssbA) [Staphylococcus aureus strain 85]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |