Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CHY23_RS10460 | Genome accession | NZ_CP022715 |
| Coordinates | 2186127..2186573 (-) | Length | 148 a.a. |
| NCBI ID | WP_005597397.1 | Uniprot ID | B0BPG5 |
| Organism | Actinobacillus pleuropneumoniae strain KL 16 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2181127..2191573
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHY23_RS10435 (CHY23_02113) | yacG | 2182034..2182222 (-) | 189 | WP_005597388.1 | DNA gyrase inhibitor YacG | - |
| CHY23_RS10440 (CHY23_02114) | coaE | 2182204..2182842 (-) | 639 | WP_005597390.1 | dephospho-CoA kinase | - |
| CHY23_RS10445 (CHY23_02115) | - | 2182864..2183502 (-) | 639 | WP_005597392.1 | prepilin peptidase | - |
| CHY23_RS10450 (CHY23_02116) | pilC | 2183529..2184731 (-) | 1203 | WP_005597394.1 | type II secretion system F family protein | Machinery gene |
| CHY23_RS10455 (CHY23_02117) | pilB | 2184715..2186109 (-) | 1395 | WP_117374128.1 | GspE/PulE family protein | Machinery gene |
| CHY23_RS10460 (CHY23_02118) | pilA | 2186127..2186573 (-) | 447 | WP_005597397.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| CHY23_RS10465 (CHY23_02119) | radA | 2186755..2188134 (+) | 1380 | WP_005597398.1 | DNA repair protein RadA | - |
| CHY23_RS10470 (CHY23_02120) | - | 2188178..2188411 (-) | 234 | WP_005597399.1 | YgjV family protein | - |
| CHY23_RS10475 (CHY23_02121) | folA | 2188538..2189026 (-) | 489 | WP_005597400.1 | type 3 dihydrofolate reductase | - |
| CHY23_RS10480 (CHY23_02122) | proB | 2189113..2190204 (+) | 1092 | WP_005597401.1 | glutamate 5-kinase | - |
| CHY23_RS10485 (CHY23_02123) | - | 2190217..2190993 (+) | 777 | WP_005597402.1 | TSUP family transporter | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15980.38 Da Isoelectric Point: 7.6257
>NTDB_id=241841 CHY23_RS10460 WP_005597397.1 2186127..2186573(-) (pilA) [Actinobacillus pleuropneumoniae strain KL 16]
MQKLSLIRPLTNAFTLIELMIVIAIIAILATVAIPSYNSYTQKAALSELLAASASYKTDVEICIYNTGDSKNCSGGQNGV
RKMTELRQAKYLNAITVEGGTITVTGKGNLQEYGYTMTPIHNGSTISWETKCKGEDLSLFPANFCASN
MQKLSLIRPLTNAFTLIELMIVIAIIAILATVAIPSYNSYTQKAALSELLAASASYKTDVEICIYNTGDSKNCSGGQNGV
RKMTELRQAKYLNAITVEGGTITVTGKGNLQEYGYTMTPIHNGSTISWETKCKGEDLSLFPANFCASN
Nucleotide
Download Length: 447 bp
>NTDB_id=241841 CHY23_RS10460 WP_005597397.1 2186127..2186573(-) (pilA) [Actinobacillus pleuropneumoniae strain KL 16]
ATGCAAAAATTAAGTCTTATTCGACCGCTTACTAACGCGTTTACTTTAATTGAATTGATGATCGTGATTGCGATTATTGC
CATTTTAGCTACGGTTGCAATTCCGTCATATAACAGTTATACCCAAAAAGCGGCGCTTTCGGAGCTATTGGCGGCATCGG
CTTCTTATAAAACGGATGTCGAGATCTGCATATATAACACCGGAGATTCTAAAAACTGTAGCGGCGGTCAAAACGGTGTC
AGAAAAATGACGGAGCTTAGACAGGCTAAATATTTAAATGCCATTACGGTGGAAGGCGGAACGATTACAGTAACGGGGAA
AGGGAATCTACAGGAATACGGTTATACGATGACACCGATTCATAACGGTAGCACTATTTCTTGGGAAACGAAATGTAAAG
GGGAGGACTTAAGTTTATTTCCGGCAAATTTCTGCGCATCAAATTAA
ATGCAAAAATTAAGTCTTATTCGACCGCTTACTAACGCGTTTACTTTAATTGAATTGATGATCGTGATTGCGATTATTGC
CATTTTAGCTACGGTTGCAATTCCGTCATATAACAGTTATACCCAAAAAGCGGCGCTTTCGGAGCTATTGGCGGCATCGG
CTTCTTATAAAACGGATGTCGAGATCTGCATATATAACACCGGAGATTCTAAAAACTGTAGCGGCGGTCAAAACGGTGTC
AGAAAAATGACGGAGCTTAGACAGGCTAAATATTTAAATGCCATTACGGTGGAAGGCGGAACGATTACAGTAACGGGGAA
AGGGAATCTACAGGAATACGGTTATACGATGACACCGATTCATAACGGTAGCACTATTTCTTGGGAAACGAAATGTAAAG
GGGAGGACTTAAGTTTATTTCCGGCAAATTTCTGCGCATCAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Glaesserella parasuis strain SC1401 |
68.919 |
100 |
0.689 |
| pilA | Haemophilus influenzae 86-028NP |
55.102 |
99.324 |
0.547 |
| pilA | Haemophilus influenzae Rd KW20 |
53.061 |
99.324 |
0.527 |