Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CHF41_RS09570 Genome accession   NZ_CP022680
Coordinates   1990576..1992324 (-) Length   582 a.a.
NCBI ID   WP_119877062.1    Uniprot ID   -
Organism   Streptococcus respiraculi strain HTS25     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1985576..1997324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHF41_RS09560 - 1989105..1989620 (-) 516 WP_119877060.1 kinase -
  CHF41_RS09565 - 1989620..1990057 (-) 438 WP_119877061.1 CoA-binding protein -
  CHF41_RS09570 rcrQ 1990576..1992324 (-) 1749 WP_119877062.1 ABC transporter ATP-binding protein Regulator
  CHF41_RS09575 rcrP 1992314..1994080 (-) 1767 WP_119877063.1 ABC transporter ATP-binding protein Regulator
  CHF41_RS09580 - 1994077..1994529 (-) 453 WP_240622957.1 MarR family winged helix-turn-helix transcriptional regulator -
  CHF41_RS09585 - 1994867..1996645 (-) 1779 WP_119877065.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 63731.92 Da        Isoelectric Point: 6.3757

>NTDB_id=241593 CHF41_RS09570 WP_119877062.1 1990576..1992324(-) (rcrQ) [Streptococcus respiraculi strain HTS25]
MENKKSSLFSQMKPYIKGFQVPFVVAVIGAIISGIITVIGPDKLSEITDLITKGLMTGIDTDKVSEIAMTLAILYGIGAV
VNYAQSFTISTIVQHFSKRLRTAIAEKINKLPLGYFDSHSQGDTLSRVTNDVDTASQSLNQSLGTVLFSSILLIAALIMM
FKTNVTLSFVAIGSVLFGFVFVGIIMGRAKGFFKSQQANLAKVNGYVEEMYSGHQVVMSYHAGGEVKGQFEMLNQALYGS
MWKSQFISGIMMPMMMFIGNFGYVMVVVTGAALTLNGHATMGTIVAFMVYVRIFSQPLSQIAQGLTVLQSASAAMGRVFE
FLGEQEMEDDQARPQQLSSVKGDVTFDHVSFGYLPDQTIIHDFSATAKAGQKIAIVGPTGAGKTTIVNLLMKFYDINQGR
ILIDGIDIKSMKRSEVHAAFSMVLQDTWLFEGTIKENLIYNQSNVSDEAVIEAAKAVGVHHFIMTLPKGYDTLLDDTVTL
SVGQKQLLTIARALLKNAPLLILDEATSSVDTRTEELLQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HDTLMTQQGFYANLYNSQFVEE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=241593 CHF41_RS09570 WP_119877062.1 1990576..1992324(-) (rcrQ) [Streptococcus respiraculi strain HTS25]
ATGGAAAATAAAAAATCTTCTTTATTTAGCCAGATGAAGCCCTATATCAAAGGCTTCCAAGTTCCTTTTGTCGTTGCGGT
GATTGGAGCGATTATCTCAGGCATTATCACGGTGATTGGTCCTGATAAACTCAGCGAGATTACAGACTTGATTACTAAGG
GTTTGATGACGGGGATTGATACTGATAAAGTTTCTGAAATCGCGATGACCCTAGCTATTCTTTATGGAATTGGTGCGGTG
GTCAACTACGCTCAGTCCTTTACGATTTCAACGATTGTTCAGCATTTTTCAAAACGCTTGCGGACAGCTATTGCAGAAAA
AATCAACAAGCTTCCTCTAGGCTATTTTGATAGTCATTCCCAAGGGGATACCTTATCTCGTGTGACTAATGACGTGGATA
CGGCTAGCCAATCCCTCAACCAAAGTTTGGGGACAGTCCTTTTTTCTAGTATTCTCTTGATTGCTGCGCTCATTATGATG
TTTAAAACCAATGTGACTCTGTCCTTTGTAGCAATTGGATCGGTCTTGTTTGGCTTTGTCTTTGTTGGCATTATCATGGG
GCGTGCTAAGGGCTTTTTCAAGAGCCAGCAGGCAAATCTTGCCAAAGTCAATGGCTACGTTGAAGAAATGTACTCTGGTC
ATCAGGTAGTGATGAGTTATCATGCGGGAGGAGAAGTAAAAGGGCAGTTTGAAATGCTCAACCAAGCACTCTACGGCAGC
ATGTGGAAATCACAGTTTATTTCTGGGATTATGATGCCCATGATGATGTTTATCGGAAACTTCGGCTATGTCATGGTTGT
GGTGACTGGTGCTGCTTTGACTCTAAATGGTCATGCGACCATGGGGACGATTGTGGCCTTTATGGTCTATGTGCGGATCT
TCTCTCAACCCCTTTCTCAGATTGCCCAGGGCTTGACCGTTTTACAATCAGCCAGTGCAGCGATGGGACGTGTCTTTGAG
TTCTTGGGTGAACAAGAAATGGAAGATGACCAAGCAAGACCGCAACAGTTGTCTTCTGTAAAAGGAGATGTGACCTTTGA
CCATGTGTCCTTTGGGTATTTGCCTGATCAGACCATTATCCATGACTTCTCCGCAACAGCTAAGGCTGGGCAAAAAATTG
CCATTGTGGGACCAACAGGAGCTGGAAAGACGACCATTGTCAATCTCTTGATGAAGTTCTATGACATTAATCAAGGTCGT
ATTTTGATTGACGGGATTGATATTAAAAGCATGAAACGATCTGAAGTCCACGCTGCCTTTAGTATGGTCTTACAAGATAC
CTGGCTCTTTGAAGGAACGATTAAGGAAAATCTGATTTACAACCAAAGCAATGTTTCAGATGAAGCGGTTATCGAAGCTG
CCAAAGCAGTTGGAGTTCACCATTTTATCATGACCTTGCCTAAAGGATATGATACCCTGCTAGATGATACGGTAACTTTA
TCTGTTGGGCAAAAACAATTGTTAACCATTGCGCGTGCCTTGTTGAAAAATGCTCCTCTCCTTATCCTTGATGAGGCAAC
CAGCTCTGTTGACACAAGGACGGAGGAATTACTCCAGAAGGCCATGGATAAACTGATGGAAGGCCGTACTTCCTTTGTCA
TCGCTCACCGTCTATCCACTATCCGAAATGCGGATCTCATCTTAGTTATGAAAGACGGCAATATCATCGAACAAGGCAAC
CACGATACTCTGATGACTCAGCAGGGCTTCTATGCGAATCTATACAACAGCCAGTTTGTCGAGGAGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

70.79

100

0.708

Multiple sequence alignment