Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   CHF41_RS09575 Genome accession   NZ_CP022680
Coordinates   1992314..1994080 (-) Length   588 a.a.
NCBI ID   WP_119877063.1    Uniprot ID   -
Organism   Streptococcus respiraculi strain HTS25     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1987314..1999080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHF41_RS09560 - 1989105..1989620 (-) 516 WP_119877060.1 kinase -
  CHF41_RS09565 - 1989620..1990057 (-) 438 WP_119877061.1 CoA-binding protein -
  CHF41_RS09570 rcrQ 1990576..1992324 (-) 1749 WP_119877062.1 ABC transporter ATP-binding protein Regulator
  CHF41_RS09575 rcrP 1992314..1994080 (-) 1767 WP_119877063.1 ABC transporter ATP-binding protein Regulator
  CHF41_RS09580 - 1994077..1994529 (-) 453 WP_240622957.1 MarR family winged helix-turn-helix transcriptional regulator -
  CHF41_RS09585 - 1994867..1996645 (-) 1779 WP_119877065.1 ABC transporter ATP-binding protein -
  CHF41_RS09590 - 1996654..1998390 (-) 1737 WP_119877066.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65223.31 Da        Isoelectric Point: 5.0808

>NTDB_id=241594 CHF41_RS09575 WP_119877063.1 1992314..1994080(-) (rcrP) [Streptococcus respiraculi strain HTS25]
MSKLFKRLNSKEWLMILASIAFVCLTVWLELEVPSYMSEITKLLQLPDTTTSDLWSPGLKMLGLSLASFGASVMVGFMAS
RLAASFTTRLRKDIFHRVLDYSDAEVKRFSVPSLLTRTTNDLTQIQLLFTMGLQVATRGPIMAVWALSKIVGKSDHWLWA
VIAAVLINLVMMTILVTLAFPKQTIVQKLTDRLNSVTREGLTGIRVVRAYNAEDYQDGKFAQANEELTALNLFVSRLMAI
MNPVMMTISSGLSLAIYWIGAYLINEAELTDKLPIFSDMVVFTSYAMQVVMGFMMMSALFIILPRVLVSTKRINEVLDLT
SSITSPQVSQVGQGNVDQIVFDDVTFRYSDASEAVIEHINFTAKAGDTVAFIGSTGSGKSTLVNLIPRFYDVSEGRILLD
GVDVRDYSEADLHAKVGYIPQKAVLFSGDIRSNIDFGESKESPLNDEAIWEALDLAQAKSFVEEKEDGLSSHVAQSGSNF
SGGQRQRLAIARALARKPEILIFDDSFSALDYRTDRTLREELAKRTAGMTKLIVAQRISTIMDADQILVLDNGKVVGQGT
HQELLAQNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=241594 CHF41_RS09575 WP_119877063.1 1992314..1994080(-) (rcrP) [Streptococcus respiraculi strain HTS25]
ATGAGTAAACTATTTAAACGCTTAAATAGCAAAGAGTGGTTGATGATTCTAGCTAGTATTGCCTTTGTCTGTCTGACAGT
GTGGTTGGAGTTAGAAGTGCCAAGCTACATGTCAGAAATCACCAAGCTCTTGCAATTACCAGATACGACGACTTCAGATC
TCTGGTCGCCTGGACTTAAAATGCTGGGCTTATCGTTAGCCAGTTTTGGTGCTTCCGTCATGGTCGGTTTTATGGCTTCG
CGCTTAGCAGCGAGTTTTACGACCCGTTTGCGGAAGGACATTTTTCATCGTGTCTTAGATTACTCGGATGCGGAGGTCAA
ACGCTTTAGCGTTCCTAGTTTGTTGACGAGAACGACCAATGATTTGACCCAGATTCAGCTCTTGTTTACCATGGGTCTGC
AGGTAGCGACTCGTGGGCCGATTATGGCCGTTTGGGCGTTGAGCAAGATTGTTGGGAAGTCGGACCACTGGTTGTGGGCA
GTCATTGCGGCTGTCTTGATTAACCTTGTCATGATGACCATTTTGGTGACATTAGCCTTTCCAAAGCAAACCATTGTCCA
AAAATTGACCGATCGTTTGAACAGTGTGACGCGTGAGGGTTTGACCGGTATCCGTGTCGTTCGTGCCTATAATGCTGAAG
ACTATCAGGACGGCAAGTTTGCTCAGGCCAATGAAGAATTAACAGCGCTTAACTTGTTTGTCAGTCGCTTAATGGCTATT
ATGAATCCAGTTATGATGACGATTTCAAGTGGGTTGAGTTTGGCTATTTATTGGATTGGGGCCTATCTTATCAACGAAGC
TGAGCTAACAGATAAGCTGCCAATTTTCAGTGATATGGTGGTCTTTACGTCCTATGCCATGCAGGTTGTCATGGGCTTTA
TGATGATGAGTGCCTTATTTATCATTTTGCCTCGTGTTTTAGTGTCGACCAAGCGGATCAACGAGGTCTTGGATTTGACC
TCTTCCATTACTTCGCCTCAAGTGTCGCAAGTTGGACAAGGAAATGTAGATCAAATCGTCTTTGATGATGTGACTTTCCG
TTATTCAGACGCCTCAGAGGCAGTCATTGAACATATTAACTTTACCGCCAAAGCAGGCGATACTGTTGCCTTCATTGGCT
CAACAGGTTCTGGGAAATCTACCTTGGTCAATTTGATTCCACGTTTTTACGATGTGAGTGAGGGGCGCATTCTGTTGGAC
GGTGTCGATGTGAGAGATTACAGTGAGGCGGATTTACATGCCAAAGTCGGCTATATTCCGCAAAAAGCGGTTTTATTTTC
TGGGGATATCCGTAGCAATATCGACTTTGGGGAAAGCAAGGAAAGTCCACTCAATGACGAAGCCATTTGGGAGGCGTTAG
ATTTAGCGCAGGCCAAAAGCTTTGTCGAGGAAAAAGAGGACGGCCTATCTTCCCACGTTGCCCAGTCTGGAAGCAATTTC
TCAGGTGGGCAGCGCCAGCGTCTCGCGATTGCCCGTGCCCTTGCTCGTAAGCCTGAAATTTTGATTTTTGATGACTCCTT
CTCAGCTCTTGATTATCGTACGGATCGTACTCTTCGGGAGGAACTCGCAAAGCGTACTGCTGGTATGACCAAGTTGATTG
TTGCACAGCGGATTTCAACTATTATGGATGCGGATCAAATCTTGGTGCTTGACAACGGAAAAGTAGTCGGTCAGGGAACG
CATCAGGAATTACTTGCACAGAACGAAGTTTATCAAGAAATTGCTTATTCACAATTATCGAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(19-292)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.833

100

0.702

Multiple sequence alignment