Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   CHF41_RS06825 Genome accession   NZ_CP022680
Coordinates   1401819..1403198 (+) Length   459 a.a.
NCBI ID   WP_119876574.1    Uniprot ID   -
Organism   Streptococcus respiraculi strain HTS25     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396819..1408198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHF41_RS06800 pstA 1397702..1398589 (+) 888 WP_119876569.1 phosphate ABC transporter permease PstA -
  CHF41_RS06805 pstB 1398605..1399408 (+) 804 WP_119876570.1 phosphate ABC transporter ATP-binding protein PstB -
  CHF41_RS06810 pstB 1399421..1400179 (+) 759 WP_119876571.1 phosphate ABC transporter ATP-binding protein PstB -
  CHF41_RS06815 phoU 1400198..1400854 (+) 657 WP_119876572.1 phosphate signaling complex protein PhoU -
  CHF41_RS06820 ciaR 1401155..1401829 (+) 675 WP_119876573.1 response regulator transcription factor Regulator
  CHF41_RS06825 ciaH 1401819..1403198 (+) 1380 WP_119876574.1 sensor histidine kinase Regulator
  CHF41_RS06830 - 1403442..1405208 (+) 1767 WP_119876575.1 flavocytochrome c -
  CHF41_RS06835 - 1405329..1405850 (-) 522 WP_119876576.1 DNA topology modulation protein -
  CHF41_RS06840 rpsT 1405905..1406153 (-) 249 WP_012027069.1 30S ribosomal protein S20 -
  CHF41_RS06845 coaA 1406211..1407131 (-) 921 WP_119876577.1 type I pantothenate kinase -
  CHF41_RS06850 - 1407228..1407818 (+) 591 WP_119876578.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 459 a.a.        Molecular weight: 52341.39 Da        Isoelectric Point: 8.6848

>NTDB_id=241582 CHF41_RS06825 WP_119876574.1 1401819..1403198(+) (ciaH) [Streptococcus respiraculi strain HTS25]
MLIKFRKLYHTDNFSYFIRYFAVFTLIFGLMTVIIFQLMRSTMYQTSDENFKEIASSPEMIMEFARARGLSPEAEIIWEK
NTNAEKPAKGANADDDKQEDKFFYPTSKMRLNANYHVILYDSKGNRLNQVDYFSGLASLKVGKNSLDAITECAVTTPFGE
KEYYRCMTIALPTNAVSAYTGLDIKYATILFNTSQIKSSIASYESTVMIVMIGFWLISIVASIYLSNVSMRPILASFQKQ
KEFVENASHELRTPLTVLQNRLESLFRHPESTIMDSSENIASSLAEVRNMRLLTTNLLNLARRDDGLKPEIVEVQPAFFD
EILTNYSIMAKENGKILEVNNQVKELIRTDKTLLKQLITILVDNAMKYSEEDGHIWIDVLLKDRFLVIKVADNGLGISSE
NKKKIFDRFYRVDKARTRQKGGFGLGLSLAKQIIETLHGSISVQDNQPKGTIFEVRLPK

Nucleotide


Download         Length: 1380 bp        

>NTDB_id=241582 CHF41_RS06825 WP_119876574.1 1401819..1403198(+) (ciaH) [Streptococcus respiraculi strain HTS25]
ATGCTGATTAAATTTCGCAAACTCTATCACACGGATAATTTTTCTTATTTTATCCGTTATTTTGCTGTTTTTACCCTCAT
TTTCGGCCTGATGACTGTGATTATTTTCCAACTCATGCGCTCGACCATGTATCAGACATCAGATGAGAATTTCAAGGAAA
TTGCGAGTTCGCCAGAGATGATCATGGAATTTGCACGAGCCCGTGGGCTATCGCCTGAGGCAGAAATCATTTGGGAAAAA
AATACCAATGCAGAAAAGCCTGCTAAGGGTGCAAATGCGGATGACGATAAGCAGGAGGACAAGTTCTTTTATCCGACTTC
CAAGATGCGTCTCAATGCCAATTACCACGTAATCCTCTATGACAGTAAGGGTAATCGTCTCAATCAAGTGGATTATTTTT
CGGGGTTAGCCAGCTTAAAAGTGGGTAAAAATTCTTTAGACGCTATTACGGAGTGTGCAGTGACCACCCCTTTTGGTGAA
AAAGAATATTATCGCTGCATGACGATTGCCTTGCCGACCAATGCCGTTTCAGCTTATACGGGTCTGGATATTAAGTATGC
GACCATTCTCTTTAATACTAGCCAGATTAAGTCATCGATTGCCTCGTATGAATCAACCGTTATGATTGTCATGATTGGGT
TCTGGCTGATTTCGATTGTGGCCAGCATCTATCTTTCGAATGTCAGCATGCGTCCGATTCTAGCGAGTTTCCAAAAGCAG
AAGGAATTTGTCGAAAATGCCAGCCACGAATTACGAACCCCTCTAACAGTCTTGCAAAATCGTTTGGAAAGCCTATTTAG
ACATCCTGAATCAACCATTATGGATAGTAGTGAGAACATTGCCTCAAGCCTAGCAGAAGTGCGCAATATGCGGTTGTTAA
CGACCAATTTATTAAATCTCGCTCGGCGTGATGACGGCCTAAAACCCGAAATCGTAGAAGTCCAGCCTGCTTTCTTTGAT
GAAATCTTGACCAACTATAGCATCATGGCTAAGGAAAATGGGAAAATCTTGGAAGTCAATAATCAGGTCAAGGAGTTGAT
TCGGACAGATAAGACCTTGCTCAAGCAGTTGATAACTATTCTCGTGGACAATGCGATGAAGTATTCAGAAGAGGACGGGC
ATATCTGGATTGACGTCTTGCTAAAAGACCGCTTCCTAGTAATCAAAGTTGCAGATAATGGTCTTGGGATCAGCTCTGAA
AATAAAAAGAAGATTTTTGATCGTTTCTACCGAGTTGACAAGGCTAGAACCCGCCAAAAAGGTGGTTTTGGACTCGGCTT
ATCTCTAGCCAAACAAATTATCGAAACACTACATGGTAGCATTAGTGTTCAAGACAATCAACCAAAGGGAACGATTTTCG
AAGTTAGATTACCGAAGTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(240-306)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(350-458)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

52.516

99.564

0.523
  ciaH Streptococcus pneumoniae Rx1

51.422

99.564

0.512
  ciaH Streptococcus pneumoniae D39

51.422

99.564

0.512
  ciaH Streptococcus pneumoniae R6

51.422

99.564

0.512
  ciaH Streptococcus pneumoniae TIGR4

51.422

99.564

0.512

Multiple sequence alignment