Detailed information NTG0240438

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: CG798_RS17710
• Genome accession: NZ_CP022531
• Coordinates: 3555391..3556461 (-)
• Length: 356 a.a.
• NCBI ID: WP_003153083.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain TB1501
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3550391..3561461

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG798_RS17660 (CG798_17660)	-	3550451..3551035 (-)	585	WP_015240205.1	signal peptidase I	-
CG798_RS17665 (CG798_17665)	tapA	3551007..3551678 (-)	672	WP_020954230.1	amyloid fiber anchoring/assembly protein TapA	-
CG798_RS17670 (CG798_17670)	-	3551937..3552266 (+)	330	WP_012117979.1	DUF3889 domain-containing protein	-
CG798_RS17675 (CG798_17675)	-	3552306..3552485 (-)	180	WP_003153093.1	YqzE family protein	-
CG798_RS17680 (CG798_17680)	comGG	3552542..3552919 (-)	378	WP_012117980.1	competence type IV pilus minor pilin ComGG	Machinery gene
CG798_RS17685 (CG798_17685)	comGF	3552920..3553420 (-)	501	WP_257899725.1	competence type IV pilus minor pilin ComGF	-
CG798_RS17690 (CG798_17690)	comGE	3553329..3553643 (-)	315	WP_012117982.1	competence type IV pilus minor pilin ComGE	-
CG798_RS17695 (CG798_17695)	comGD	3553627..3554064 (-)	438	WP_043020787.1	competence type IV pilus minor pilin ComGD	Machinery gene
CG798_RS17700 (CG798_17700)	comGC	3554054..3554320 (-)	267	WP_042635730.1	competence type IV pilus major pilin ComGC	Machinery gene
CG798_RS17705 (CG798_17705)	comGB	3554367..3555404 (-)	1038	WP_094031834.1	competence type IV pilus assembly protein ComGB	Machinery gene
CG798_RS17710 (CG798_17710)	comGA	3555391..3556461 (-)	1071	WP_003153083.1	competence type IV pilus ATPase ComGA	Machinery gene
CG798_RS17715 (CG798_17715)	-	3556655..3557605 (-)	951	WP_007408319.1	magnesium transporter CorA family protein	-
CG798_RS17720 (CG798_17720)	-	3557751..3559052 (+)	1302	WP_021494315.1	hemolysin family protein	-
CG798_RS17725 (CG798_17725)	-	3559090..3559920 (-)	831	WP_007408317.1	STAS domain-containing protein	-
CG798_RS17735 (CG798_17735)	-	3560127..3560516 (-)	390	WP_094031835.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
CG798_RS17740 (CG798_17740)	-	3560744..3560989 (+)	246	WP_003153078.1	DUF2626 domain-containing protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 40529.85 Da
• Isoelectric Point: 9.4729

>NTDB_id=240438 CG798_RS17710 WP_003153083.1 3555391..3556461(-) (comGA) [Bacillus velezensis strain TB1501]
MKNIETYSRNIINEAYTARASDIHIVPREKDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD

Nucleotide

• Length: 1071 bp

>NTDB_id=240438 CG798_RS17710 WP_003153083.1 3555391..3556461(-) (comGA) [Bacillus velezensis strain TB1501]
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAAGGATGCTTTCATTCATTTTCGCATCGGCCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGCG
TAAGGCTTATTTCTCATTTTAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGTAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACGGAAACCGTTCATTTAAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCGGCAGATTCCCCCTCTGGATAAACTGTCCTTATTTCGGGGGGCAGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCGCACGGCCTGCTTCTGTTTACCGGCCCCACCGGATCTGGAAAAACGACCACTCTTTACTCGCTTGTCAACTAT
GCAAAAAGGCATTTCAACCGGCGTATTGTCACGCTTGAAGACCCCGTAGAAACAAGAGATGAGGATGTGTTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATGATCATCTTAG
GGGAAATCAGAGATGCCGAGACGGCTGAAATCGCAGTCCGCGCGGCCATGACGGGACACCTCGTTCTTTCAAGCCTGCAT
ACAAGAGATGCTAAGGGCGCCATATACAGGCTGCTGGAGTTCGGCGTGAACATGACAGAAATTGAACAAACCGTCATTGC
TATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCCGTGTACTGCCGGATGTACA
GGCAGACACGCCGTGCGGGCATTTATGAACTGCTCTACGGGAAAAACCTCACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATCGCGCTCGGCTATGTCACGACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-275)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Bacillus subtilis subsp. subtilis str. 168	82.022	100	0.82
pilB	Glaesserella parasuis strain SC1401	38.793	97.753	0.379
pilF	Thermus thermophilus HB27	37.892	98.596	0.374