Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | LPL_RS04835 | Genome accession | NC_006369 |
| Coordinates | 1074096..1074695 (+) | Length | 199 a.a. |
| NCBI ID | WP_011215096.1 | Uniprot ID | - |
| Organism | Legionella pneumophila str. Lens | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1069096..1079695
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPL_RS04820 (lpl0957) | ravI | 1071042..1072049 (-) | 1008 | WP_011215093.1 | Dot/Icm T4SS effector RavI | - |
| LPL_RS04825 (lpl0958) | pilM | 1072466..1073530 (+) | 1065 | WP_011215094.1 | type IV pilus assembly protein PilM | Machinery gene |
| LPL_RS04830 (lpl0959) | pilN | 1073534..1074082 (+) | 549 | WP_011215095.1 | PilN domain-containing protein | Machinery gene |
| LPL_RS04835 (lpl0960) | pilO | 1074096..1074695 (+) | 600 | WP_011215096.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LPL_RS04840 (lpl0961) | pilP | 1074692..1075276 (+) | 585 | WP_011215097.1 | pilus assembly protein PilP | Machinery gene |
| LPL_RS04845 (lpl0962) | pilQ | 1075280..1077376 (+) | 2097 | WP_011215098.1 | type IV pilus secretin PilQ | Machinery gene |
| LPL_RS04850 (lpl0963) | aroK | 1077822..1078349 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| LPL_RS04855 (lpl0964) | aroB | 1078336..1079445 (+) | 1110 | WP_011215099.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22482.18 Da Isoelectric Point: 5.3369
>NTDB_id=23834 LPL_RS04835 WP_011215096.1 1074096..1074695(+) (pilO) [Legionella pneumophila str. Lens]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=23834 LPL_RS04835 WP_011215096.1 1074096..1074695(+) (pilO) [Legionella pneumophila str. Lens]
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTGGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTGGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
98.995 |
100 |
0.99 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
37.696 |
95.98 |
0.362 |