Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CFH90_RS00930 | Genome accession | NZ_CP022298 |
| Coordinates | 204386..204970 (+) | Length | 194 a.a. |
| NCBI ID | WP_004691666.1 | Uniprot ID | A0A7H8SPE4 |
| Organism | Acinetobacter johnsonii strain IC001 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 199386..209970
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFH90_RS00910 (CFH90_00915) | - | 200308..200682 (-) | 375 | WP_125274284.1 | hypothetical protein | - |
| CFH90_RS00915 (CFH90_00920) | tenA | 200845..201519 (-) | 675 | WP_087011848.1 | thiaminase II | - |
| CFH90_RS00920 (CFH90_00925) | - | 201731..202810 (+) | 1080 | WP_058870674.1 | DUF475 domain-containing protein | - |
| CFH90_RS00925 (CFH90_00930) | - | 202970..204334 (+) | 1365 | WP_004978200.1 | MFS transporter | - |
| CFH90_RS00930 (CFH90_00935) | ssb | 204386..204970 (+) | 585 | WP_004691666.1 | single-stranded DNA-binding protein | Machinery gene |
| CFH90_RS00935 (CFH90_00940) | - | 205180..206499 (-) | 1320 | Protein_184 | aspartate ammonia-lyase | - |
| CFH90_RS00940 (CFH90_00945) | tnpA | 206587..206970 (+) | 384 | WP_005083376.1 | IS66-like element accessory protein TnpA | - |
| CFH90_RS00945 (CFH90_00950) | tnpB | 206967..207302 (+) | 336 | WP_160243458.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CFH90_RS00950 (CFH90_00955) | tnpC | 207377..208981 (+) | 1605 | WP_126034889.1 | IS66 family transposase | - |
| CFH90_RS18920 | - | 208981..209118 (-) | 138 | Protein_188 | hypothetical protein | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21300.03 Da Isoelectric Point: 6.4819
>NTDB_id=238179 CFH90_RS00930 WP_004691666.1 204386..204970(+) (ssb) [Acinetobacter johnsonii strain IC001]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEQMQGGNDGYAQPRFNNNQGGGYNNNNNQGGYGGNPAAGNSNNQQ
SGYANNNPSGFAPKAAPQSAPAAAPADMDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDNNRQQGEQMQGGNDGYAQPRFNNNQGGGYNNNNNQGGYGGNPAAGNSNNQQ
SGYANNNPSGFAPKAAPQSAPAAAPADMDDDLPF
Nucleotide
Download Length: 585 bp
>NTDB_id=238179 CFH90_RS00930 WP_004691666.1 204386..204970(+) (ssb) [Acinetobacter johnsonii strain IC001]
ATGCGCGGTGTAAATAAAGTTATTTTAGTGGGCACATTAGGCCGAGATCCAGAGACGAAAACTTTTCCAAACGGTGGTTC
GTTGACCCAGTTTTCAATTGCAACGAGCGACTCTTGGACAGATAAAAGCACCGGTGAGCGTAAAGAGCAAACCGAATGGC
ACCGTATTGTGTTACACAACCGCCTAGGTGAAATTGCGCAACAATACCTACGTAAAGGTTCGAAAGTTTATATTGAAGGG
TCACTGCGTACCCGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACCACAGAAATTCGTGGTGAGCAAATGCAGAT
GCTCGACAACAACCGTCAGCAAGGTGAGCAAATGCAAGGCGGAAATGATGGTTATGCACAACCACGTTTCAACAATAACC
AAGGTGGTGGTTATAACAATAACAACAACCAAGGTGGTTATGGCGGCAATCCTGCAGCGGGTAATAGCAACAATCAACAA
AGTGGTTATGCGAACAATAACCCAAGCGGTTTTGCACCAAAGGCGGCTCCTCAGTCAGCGCCTGCGGCAGCACCAGCAGA
TATGGATGATGATCTTCCGTTCTAA
ATGCGCGGTGTAAATAAAGTTATTTTAGTGGGCACATTAGGCCGAGATCCAGAGACGAAAACTTTTCCAAACGGTGGTTC
GTTGACCCAGTTTTCAATTGCAACGAGCGACTCTTGGACAGATAAAAGCACCGGTGAGCGTAAAGAGCAAACCGAATGGC
ACCGTATTGTGTTACACAACCGCCTAGGTGAAATTGCGCAACAATACCTACGTAAAGGTTCGAAAGTTTATATTGAAGGG
TCACTGCGTACCCGTCAGTGGACAGATCAAAATGGTCAAGAACGCTACACCACAGAAATTCGTGGTGAGCAAATGCAGAT
GCTCGACAACAACCGTCAGCAAGGTGAGCAAATGCAAGGCGGAAATGATGGTTATGCACAACCACGTTTCAACAATAACC
AAGGTGGTGGTTATAACAATAACAACAACCAAGGTGGTTATGGCGGCAATCCTGCAGCGGGTAATAGCAACAATCAACAA
AGTGGTTATGCGAACAATAACCCAAGCGGTTTTGCACCAAAGGCGGCTCCTCAGTCAGCGCCTGCGGCAGCACCAGCAGA
TATGGATGATGATCTTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
50.246 |
100 |
0.526 |
| ssb | Vibrio cholerae strain A1552 |
44.724 |
100 |
0.459 |
| ssb | Neisseria meningitidis MC58 |
41.414 |
100 |
0.423 |
| ssb | Neisseria gonorrhoeae MS11 |
41.414 |
100 |
0.423 |