Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   CFA72_RS04770 Genome accession   NZ_CP022206
Coordinates   894678..895988 (+) Length   436 a.a.
NCBI ID   WP_023610011.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain GURSA1     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 889678..900988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFA72_RS04750 (CFA72_04750) phoU 890270..890923 (+) 654 WP_002984514.1 phosphate signaling complex protein PhoU -
  CFA72_RS04760 (CFA72_04760) - 891128..893665 (+) 2538 WP_023610002.1 M1 family metallopeptidase -
  CFA72_RS04765 (CFA72_04765) ciaR 894011..894685 (+) 675 WP_010922355.1 response regulator transcription factor Regulator
  CFA72_RS04770 (CFA72_04770) ciaH 894678..895988 (+) 1311 WP_023610011.1 cell wall metabolism sensor histidine kinase WalK Regulator
  CFA72_RS04775 (CFA72_04775) rpsT 896113..896361 (-) 249 WP_172450286.1 30S ribosomal protein S20 -
  CFA72_RS04780 (CFA72_04780) coaA 896415..897335 (-) 921 WP_010922353.1 type I pantothenate kinase -
  CFA72_RS04785 (CFA72_04785) - 897603..898196 (+) 594 WP_010922352.1 class I SAM-dependent methyltransferase -
  CFA72_RS04790 (CFA72_04790) - 898849..899238 (+) 390 WP_002984531.1 cytidine deaminase -
  CFA72_RS04795 (CFA72_04795) - 899332..900384 (+) 1053 WP_002989701.1 BMP family protein -

Sequence


Protein


Download         Length: 436 a.a.        Molecular weight: 50065.56 Da        Isoelectric Point: 9.0837

>NTDB_id=237558 CFA72_RS04770 WP_023610011.1 894678..895988(+) (ciaH) [Streptococcus pyogenes strain GURSA1]
MNKLKKEILSDNYNHFFHFFAVFTGIFVIMTIIILQIMRFGVYSSVDSSLVSVSNNASSYANRTMARISSFYFDTENNII
KALPDSDSSKLLGTPAANTDIILFSANGTILNAFDAFSNYQNFHLDKHRLGSIETTSLMNFYGQEEKYHTITVRVHIKNY
PAVAYMMAVVNVEQLDRANERYERIIIIVMSVFWLISILASIYLAKWSRKPILESYEKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHLASSLDEVRNMRILTTNLLNLARRDDGINPQWTHLDTDFFNAIFENYELVAKEYGKIFYFQN
QVNRSLRMDKALLKQLITILFDNAIKYTDKNGIIEIIAKTTDKNLLISVIDNGPGITDEEKKKIFDRFYRVDKARTRQTG
GFGLGLALAQQIVMSLKGNITVKDNDPKGSIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=237558 CFA72_RS04770 WP_023610011.1 894678..895988(+) (ciaH) [Streptococcus pyogenes strain GURSA1]
ATGAATAAATTAAAAAAAGAGATTTTATCAGATAACTATAACCACTTTTTTCATTTTTTTGCGGTTTTTACAGGTATTTT
TGTCATTATGACTATTATTATCTTACAGATTATGCGGTTTGGCGTTTATTCGTCAGTTGACAGTAGTTTAGTTTCTGTTA
GTAATAATGCAAGTAGCTATGCTAATCGTACGATGGCTAGAATATCTTCTTTTTACTTTGATACTGAAAATAACATTATT
AAGGCGCTGCCTGATTCAGATAGTTCTAAGTTATTAGGAACGCCTGCAGCTAATACAGATATCATTTTGTTTAGTGCTAA
TGGAACAATTTTAAATGCTTTTGATGCGTTTTCTAACTATCAAAATTTTCATTTAGATAAACACCGTTTGGGGAGTATTG
AAACCACCAGTTTAATGAATTTTTATGGACAAGAAGAAAAATACCATACGATAACCGTAAGGGTTCATATCAAAAATTAT
CCTGCAGTTGCCTATATGATGGCAGTAGTAAATGTGGAACAATTAGACCGCGCTAATGAACGTTACGAGCGCATTATTAT
TATAGTTATGAGTGTTTTTTGGCTAATTTCTATTTTAGCAAGTATTTATTTAGCCAAGTGGAGCAGAAAACCTATTTTAG
AAAGCTATGAAAAACAAAAAATGTTTGTTGAAAATGCTAGTCATGAACTAAGGACCCCTTTGGCGGTCTTACAGAATCGT
CTGGAATCGCTTTTTCGTAAGCCCAACGAAACGATATTAGAAAATAGTGAGCATCTCGCTTCTAGTTTAGACGAGGTTCG
CAACATGCGCATCTTAACAACTAATTTATTAAATTTAGCAAGACGAGATGATGGCATTAATCCACAGTGGACTCATTTAG
ATACAGATTTTTTTAATGCTATTTTTGAGAATTATGAACTAGTTGCTAAAGAATATGGAAAAATATTTTATTTTCAGAAC
CAAGTCAATAGATCGTTAAGAATGGATAAGGCTTTACTAAAACAATTAATAACGATTTTATTTGACAATGCTATTAAATA
TACAGATAAAAATGGTATTATTGAAATTATAGCGAAAACAACGGACAAAAATTTATTAATTTCTGTTATTGATAATGGTC
CAGGGATAACAGATGAAGAAAAGAAAAAGATTTTTGATCGTTTTTATCGAGTTGACAAAGCTAGAACACGGCAAACAGGT
GGATTTGGCTTGGGGTTGGCTTTAGCTCAGCAAATCGTGATGTCTTTAAAAGGAAATATTACAGTAAAGGATAATGATCC
TAAAGGTAGTATTTTTGAAGTCAAACTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.666

100

0.578

  ciaH Streptococcus pneumoniae Rx1

51.37

100

0.516

  ciaH Streptococcus pneumoniae D39

51.37

100

0.516

  ciaH Streptococcus pneumoniae R6

51.37

100

0.516

  ciaH Streptococcus pneumoniae TIGR4

51.37

100

0.516


Multiple sequence alignment