Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | MYMAC_RS05540 | Genome accession | NZ_CP022203 |
| Coordinates | 1319216..1319716 (+) | Length | 166 a.a. |
| NCBI ID | WP_095957329.1 | Uniprot ID | A0A250JPU8 |
| Organism | Corallococcus macrosporus DSM 14697 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1314216..1324716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYMAC_RS05520 (MYMAC_001098) | - | 1314772..1315233 (+) | 462 | WP_013935756.1 | PTS sugar transporter subunit IIA | - |
| MYMAC_RS05525 (MYMAC_001099) | - | 1315267..1316112 (+) | 846 | WP_043709168.1 | hypothetical protein | - |
| MYMAC_RS05530 (MYMAC_001100) | dtd | 1316109..1316570 (-) | 462 | WP_013935754.1 | D-aminoacyl-tRNA deacylase | - |
| MYMAC_RS05535 (MYMAC_001101) | dacB | 1316756..1319005 (+) | 2250 | WP_095957328.1 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | - |
| MYMAC_RS05540 (MYMAC_001102) | ssb | 1319216..1319716 (+) | 501 | WP_095957329.1 | single-stranded DNA-binding protein | Machinery gene |
| MYMAC_RS05545 (MYMAC_001103) | - | 1319832..1320515 (-) | 684 | WP_095957330.1 | succinate dehydrogenase | - |
| MYMAC_RS05550 (MYMAC_001104) | - | 1320777..1321661 (+) | 885 | WP_095957331.1 | Hsp33 family molecular chaperone HslO | - |
| MYMAC_RS05555 (MYMAC_001105) | - | 1321696..1322727 (+) | 1032 | WP_095961478.1 | Leu/Phe/Val dehydrogenase | - |
| MYMAC_RS05560 (MYMAC_001106) | - | 1322801..1323547 (+) | 747 | WP_238539891.1 | phosphoribosyltransferase | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 17709.43 Da Isoelectric Point: 6.2405
>NTDB_id=237512 MYMAC_RS05540 WP_095957329.1 1319216..1319716(+) (ssb) [Corallococcus macrosporus DSM 14697]
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYVEG
RLQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMGGGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGHGGG
DDDIPF
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYVEG
RLQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMGGGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGHGGG
DDDIPF
Nucleotide
Download Length: 501 bp
>NTDB_id=237512 MYMAC_RS05540 WP_095957329.1 1319216..1319716(+) (ssb) [Corallococcus macrosporus DSM 14697]
ATGGCTGGAGGCGTGAACAAGGTCATCCTCATCGGCAACCTCGGGGCGGACCCGGAGGTCCGGTTCACTCCCGGCGGTCA
GGCGGTCGCCAACTTCCGCATCGCCACCAGCGAGAGCTGGGTCGACAAGAATGGCCAGAAGCAGGAGCGGACCGAATGGC
ACCGCATCGTCGTCTGGGGAAAGCTCGCGGAGCTCTGCGGCGAGTACCTGAAGAAGGGACGGCAGTGCTACGTGGAGGGC
CGCCTGCAGACGCGCGAGTGGACGGACAAGGAGAACCGGAAGAACTACACCACCGAGGTGGTGGCCAACGCCGTGACGTT
CCTCGGCGGTGGCGGGCGTGACGCCGGGGACGGCATGGGCGGTGGAGGCGGGGGTGGGGGACGCCGGCAGTTCTCCCAGC
AGCGCGGGGGCGACAACAACGACTACGGTCAGCCTCCCCCGGACGACATGGGCGGCGGCCACGGTGGCCATGGCGGCGGC
GACGACGACATCCCCTTCTAG
ATGGCTGGAGGCGTGAACAAGGTCATCCTCATCGGCAACCTCGGGGCGGACCCGGAGGTCCGGTTCACTCCCGGCGGTCA
GGCGGTCGCCAACTTCCGCATCGCCACCAGCGAGAGCTGGGTCGACAAGAATGGCCAGAAGCAGGAGCGGACCGAATGGC
ACCGCATCGTCGTCTGGGGAAAGCTCGCGGAGCTCTGCGGCGAGTACCTGAAGAAGGGACGGCAGTGCTACGTGGAGGGC
CGCCTGCAGACGCGCGAGTGGACGGACAAGGAGAACCGGAAGAACTACACCACCGAGGTGGTGGCCAACGCCGTGACGTT
CCTCGGCGGTGGCGGGCGTGACGCCGGGGACGGCATGGGCGGTGGAGGCGGGGGTGGGGGACGCCGGCAGTTCTCCCAGC
AGCGCGGGGGCGACAACAACGACTACGGTCAGCCTCCCCCGGACGACATGGGCGGCGGCCACGGTGGCCATGGCGGCGGC
GACGACGACATCCCCTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
46.995 |
100 |
0.518 |
| ssb | Neisseria gonorrhoeae MS11 |
42.938 |
100 |
0.458 |
| ssb | Glaesserella parasuis strain SC1401 |
40.884 |
100 |
0.446 |
| ssb | Neisseria meningitidis MC58 |
42.197 |
100 |
0.44 |