Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CEJ46_RS01550 | Genome accession | NZ_CP022101 |
| Coordinates | 312516..313046 (+) | Length | 176 a.a. |
| NCBI ID | WP_019282036.1 | Uniprot ID | A0A233HL27 |
| Organism | Vibrio anguillarum strain JLL237 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 307516..318046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEJ46_RS01535 (CEJ46_01535) | uvrA | 307605..310427 (-) | 2823 | WP_088721475.1 | excinuclease ABC subunit UvrA | - |
| CEJ46_RS01540 (CEJ46_01540) | galU | 310596..311465 (-) | 870 | WP_013857894.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| CEJ46_RS01545 (CEJ46_01545) | qstR | 311583..312230 (-) | 648 | WP_170895060.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| CEJ46_RS01550 (CEJ46_01550) | ssb | 312516..313046 (+) | 531 | WP_019282036.1 | single-stranded DNA-binding protein | Machinery gene |
| CEJ46_RS01555 (CEJ46_01555) | csrD | 313176..315164 (+) | 1989 | WP_088720760.1 | RNase E specificity factor CsrD | - |
| CEJ46_RS01560 (CEJ46_01560) | - | 315177..316619 (+) | 1443 | WP_088720761.1 | MSHA biogenesis protein MshI | - |
| CEJ46_RS01565 (CEJ46_01565) | gspM | 316616..317260 (+) | 645 | WP_017047102.1 | type II secretion system protein GspM | - |
| CEJ46_RS01570 (CEJ46_01570) | - | 317250..317576 (+) | 327 | WP_017050664.1 | MSHA biogenesis protein MshK | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19331.48 Da Isoelectric Point: 5.2257
>NTDB_id=236759 CEJ46_RS01550 WP_019282036.1 312516..313046(+) (ssb) [Vibrio anguillarum strain JLL237]
MASRGVNKVILVGNLGNDPEIRYMPGGAAVANITIATSDSWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMPQQQQQGGGWGQPQQPAMQKQPQQQSAPQQAQ
PQYNEPPMDFDDDIPF
MASRGVNKVILVGNLGNDPEIRYMPGGAAVANITIATSDSWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMPQQQQQGGGWGQPQQPAMQKQPQQQSAPQQAQ
PQYNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=236759 CEJ46_RS01550 WP_019282036.1 312516..313046(+) (ssb) [Vibrio anguillarum strain JLL237]
ATGGCAAGCCGTGGAGTAAATAAAGTTATTTTAGTGGGTAACCTAGGTAACGACCCAGAAATTCGTTATATGCCTGGTGG
CGCTGCTGTGGCAAATATCACCATTGCAACGTCAGATTCATGGCGTGATAAAGCAACTGGCGAGCAACGCGAAAAAACCG
AATGGCACCGTGTTGCGCTGTTTGGCAAATTAGCCGAAGTGGCTGGTGAATACTTACGTAAAGGTTCACAAGTGTACATT
GAAGGTCAGCTACAAACTCGTAAGTGGCAAGATCAAAGCGGACAAGATCGTTATACCACCGAAGTTGTCGTACAAGGTTT
TAATGGTGTGATGCAAATGTTGGGTGGCCGTGCTCAAGGTGGTGCTCCAGCGCAAGGTGGAATGCCACAACAACAGCAAC
AAGGTGGCGGATGGGGGCAACCTCAGCAGCCTGCGATGCAAAAGCAACCACAGCAGCAGTCAGCTCCTCAACAGGCTCAA
CCTCAGTATAATGAACCACCAATGGATTTTGATGACGACATCCCATTCTAA
ATGGCAAGCCGTGGAGTAAATAAAGTTATTTTAGTGGGTAACCTAGGTAACGACCCAGAAATTCGTTATATGCCTGGTGG
CGCTGCTGTGGCAAATATCACCATTGCAACGTCAGATTCATGGCGTGATAAAGCAACTGGCGAGCAACGCGAAAAAACCG
AATGGCACCGTGTTGCGCTGTTTGGCAAATTAGCCGAAGTGGCTGGTGAATACTTACGTAAAGGTTCACAAGTGTACATT
GAAGGTCAGCTACAAACTCGTAAGTGGCAAGATCAAAGCGGACAAGATCGTTATACCACCGAAGTTGTCGTACAAGGTTT
TAATGGTGTGATGCAAATGTTGGGTGGCCGTGCTCAAGGTGGTGCTCCAGCGCAAGGTGGAATGCCACAACAACAGCAAC
AAGGTGGCGGATGGGGGCAACCTCAGCAGCCTGCGATGCAAAAGCAACCACAGCAGCAGTCAGCTCCTCAACAGGCTCAA
CCTCAGTATAATGAACCACCAATGGATTTTGATGACGACATCCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
85.393 |
100 |
0.864 |
| ssb | Glaesserella parasuis strain SC1401 |
54.737 |
100 |
0.591 |
| ssb | Neisseria gonorrhoeae MS11 |
45.556 |
100 |
0.466 |
| ssb | Neisseria meningitidis MC58 |
45 |
100 |
0.46 |