Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CYFUS_RS07175 | Genome accession | NZ_CP022098 |
| Coordinates | 1712016..1712546 (+) | Length | 176 a.a. |
| NCBI ID | WP_095984562.1 | Uniprot ID | A0A250IXQ5 |
| Organism | Cystobacter fuscus strain DSM 52655 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1707016..1717546
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYFUS_RS07165 (CYFUS_001424) | - | 1708633..1709424 (+) | 792 | WP_095984560.1 | SDR family oxidoreductase | - |
| CYFUS_RS07170 (CYFUS_001425) | dacB | 1709609..1711834 (+) | 2226 | WP_095984561.1 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | - |
| CYFUS_RS07175 (CYFUS_001426) | ssb | 1712016..1712546 (+) | 531 | WP_095984562.1 | single-stranded DNA-binding protein | Machinery gene |
| CYFUS_RS07180 (CYFUS_001427) | - | 1712638..1713351 (-) | 714 | WP_095984563.1 | succinate dehydrogenase | - |
| CYFUS_RS07185 (CYFUS_001428) | - | 1713602..1714501 (+) | 900 | WP_095984564.1 | Hsp33 family molecular chaperone HslO | - |
| CYFUS_RS07190 (CYFUS_001429) | - | 1714597..1715238 (+) | 642 | WP_095984565.1 | phosphoribosyltransferase | - |
| CYFUS_RS07195 (CYFUS_001430) | selB | 1715264..1717180 (+) | 1917 | WP_095984566.1 | selenocysteine-specific translation elongation factor | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18170.87 Da Isoelectric Point: 5.7827
>NTDB_id=236692 CYFUS_RS07175 WP_095984562.1 1712016..1712546(+) (ssb) [Cystobacter fuscus strain DSM 52655]
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSDNWTDKSGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYIEG
RLQTREWTDKENRKNYTTEVVANAVTFLGGRDGAGMGGGGGGGGGGRGGGYSQQRGGGGGGGQSQGGGYDDYGAPPMDDG
GGPMGGGHGGDDDIPF
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSDNWTDKSGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYIEG
RLQTREWTDKENRKNYTTEVVANAVTFLGGRDGAGMGGGGGGGGGGRGGGYSQQRGGGGGGGQSQGGGYDDYGAPPMDDG
GGPMGGGHGGDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=236692 CYFUS_RS07175 WP_095984562.1 1712016..1712546(+) (ssb) [Cystobacter fuscus strain DSM 52655]
ATGGCTGGAGGCGTCAACAAGGTCATCCTCATTGGCAACCTGGGGGCGGACCCGGAAGTGCGCTTCACCCCGGGCGGACA
GGCGGTGGCCAACTTCCGCATCGCGACCAGCGACAACTGGACCGACAAGAGCGGCCAGAAGCAGGAGCGCACCGAGTGGC
ACCGCATCGTGGTGTGGGGAAAGCTCGCGGAGCTGTGCGGTGAGTATTTGAAGAAGGGCCGCCAGTGCTACATCGAGGGC
CGTCTGCAGACGCGCGAGTGGACGGACAAGGAGAACCGCAAGAACTACACCACCGAGGTGGTGGCCAACGCGGTGACCTT
CCTCGGGGGCCGTGACGGAGCGGGCATGGGTGGTGGTGGCGGCGGTGGTGGTGGGGGCCGCGGTGGCGGCTACTCGCAGC
AGCGCGGCGGCGGTGGTGGCGGTGGCCAGTCCCAGGGCGGCGGCTACGACGACTACGGCGCTCCTCCCATGGACGATGGC
GGTGGCCCCATGGGCGGCGGCCACGGCGGGGACGACGACATCCCGTTCTAG
ATGGCTGGAGGCGTCAACAAGGTCATCCTCATTGGCAACCTGGGGGCGGACCCGGAAGTGCGCTTCACCCCGGGCGGACA
GGCGGTGGCCAACTTCCGCATCGCGACCAGCGACAACTGGACCGACAAGAGCGGCCAGAAGCAGGAGCGCACCGAGTGGC
ACCGCATCGTGGTGTGGGGAAAGCTCGCGGAGCTGTGCGGTGAGTATTTGAAGAAGGGCCGCCAGTGCTACATCGAGGGC
CGTCTGCAGACGCGCGAGTGGACGGACAAGGAGAACCGCAAGAACTACACCACCGAGGTGGTGGCCAACGCGGTGACCTT
CCTCGGGGGCCGTGACGGAGCGGGCATGGGTGGTGGTGGCGGCGGTGGTGGTGGGGGCCGCGGTGGCGGCTACTCGCAGC
AGCGCGGCGGCGGTGGTGGCGGTGGCCAGTCCCAGGGCGGCGGCTACGACGACTACGGCGCTCCTCCCATGGACGATGGC
GGTGGCCCCATGGGCGGCGGCCACGGCGGGGACGACGACATCCCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
47.486 |
100 |
0.483 |
| ssb | Neisseria meningitidis MC58 |
40.556 |
100 |
0.415 |
| ssb | Neisseria gonorrhoeae MS11 |
40.556 |
100 |
0.415 |
| ssb | Glaesserella parasuis strain SC1401 |
38.095 |
100 |
0.409 |