Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CEP87_RS05460 Genome accession   NZ_CP022043
Coordinates   1271531..1271908 (-) Length   125 a.a.
NCBI ID   WP_011514416.1    Uniprot ID   A0A1U6GPZ7
Organism   Psychrobacter cryohalolentis strain FDAARGOS_308     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1266531..1276908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEP87_RS05440 (CEP87_05445) - 1267774..1268748 (-) 975 WP_011514412.1 CheR family methyltransferase -
  CEP87_RS05445 (CEP87_05450) - 1268938..1269942 (-) 1005 Protein_1040 methyl-accepting chemotaxis protein -
  CEP87_RS05450 (CEP87_05455) - 1270469..1270999 (-) 531 WP_011514414.1 chemotaxis protein CheW -
  CEP87_RS05455 (CEP87_05460) - 1271003..1271365 (-) 363 WP_011514415.1 PleD family two-component system response regulator -
  CEP87_RS05460 (CEP87_05465) pilG 1271531..1271908 (-) 378 WP_011514416.1 twitching motility response regulator PilG Regulator
  CEP87_RS05465 (CEP87_05470) - 1272568..1273779 (+) 1212 WP_011514417.1 efflux RND transporter periplasmic adaptor subunit -
  CEP87_RS05470 (CEP87_05475) - 1274062..1274784 (+) 723 WP_011514418.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14050.14 Da        Isoelectric Point: 4.7289

>NTDB_id=236079 CEP87_RS05460 WP_011514416.1 1271531..1271908(-) (pilG) [Psychrobacter cryohalolentis strain FDAARGOS_308]
MENNFDGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDHNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
SKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFEAINQYR

Nucleotide


Download         Length: 378 bp        

>NTDB_id=236079 CEP87_RS05460 WP_011514416.1 1271531..1271908(-) (pilG) [Psychrobacter cryohalolentis strain FDAARGOS_308]
ATGGAAAATAATTTTGATGGTTTAAAAGTAATGGTTATTGATGACTCAAAAACCATTCGCCGTACCGCAGAAACCTTGCT
GCAAAAAGCGGGCTGTGAAGTTGTCACTGCCATTGATGGATTTGATGCTTTGGCTAAGATTGTCGACCACAATCCAGATA
TTATTTTTGTGGATATCATGATGCCACGTTTGGACGGTTATCAAACTTGTGCCTTGATTAAAAATAACCCTGACTATGCC
AGTAAACCTGTGATTATGTTGTCATCTAAAGATGGTTTATTTGATAAAGCCCGTGGACGTATTGTAGGTTCTGATGAATA
TCTGACCAAACCGTTTAGTAAGGATGAGCTTTTTGAGGCAATTAATCAGTATCGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1U6GPZ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.419

99.2

0.768
  vicR Streptococcus mutans UA159

40.517

92.8

0.376
  micA Streptococcus pneumoniae Cp1015

42.202

87.2

0.368
  pilH Synechocystis sp. PCC 6803

40.351

91.2

0.368

Multiple sequence alignment